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  5. Gb_27183

Gb_27183


Description : Transcriptional corepressor SEUSS OS=Arabidopsis thaliana (sp|q8w234|seuss_arath : 266.0)


Gene families : OG0001132 (Archaeplastida) Phylogenetic Tree(s): OG0001132_tree ,
OG_05_0010131 (LandPlants) Phylogenetic Tree(s): OG_05_0010131_tree ,
OG_06_0016581 (SeedPlants) Phylogenetic Tree(s): OG_06_0016581_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_27183
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00069p00119460 evm_27.TU.AmTr_v1... Probable transcriptional regulator SLK2 OS=Arabidopsis thaliana 0.03 Archaeplastida
AT1G43850 SEU SEUSS transcriptional co-regulator 0.05 Archaeplastida
GSVIVT01010013001 No alias Transcriptional corepressor SEUSS OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01010616001 No alias Probable transcriptional regulator SLK2 OS=Arabidopsis thaliana 0.05 Archaeplastida
LOC_Os06g03600.1 No alias Probable transcriptional regulator SLK2 OS=Arabidopsis... 0.05 Archaeplastida
LOC_Os11g10060.1 No alias Transcriptional corepressor SEUSS OS=Arabidopsis... 0.06 Archaeplastida
LOC_Os11g10070.1 No alias Transcriptional corepressor SEUSS OS=Arabidopsis... 0.02 Archaeplastida
MA_13825g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_33392g0010 No alias Probable transcriptional regulator SLK2 OS=Arabidopsis... 0.04 Archaeplastida
Mp1g03270.1 No alias Transcriptional corepressor SEUSS OS=Arabidopsis... 0.04 Archaeplastida
Mp8g17020.1 No alias Transcriptional corepressor SEUSS OS=Arabidopsis... 0.05 Archaeplastida
Pp3c16_1979V3.1 No alias No annotation 0.02 Archaeplastida
Pp3c16_1990V3.1 No alias SEUSS transcriptional co-regulator 0.02 Archaeplastida
Pp3c25_7810V3.1 No alias SEUSS transcriptional co-regulator 0.04 Archaeplastida
Pp3c6_27010V3.1 No alias SEUSS transcriptional co-regulator 0.02 Archaeplastida
Solyc03g026190.3.1 No alias Probable transcriptional regulator SLK2 OS=Arabidopsis... 0.03 Archaeplastida
Solyc06g059750.3.1 No alias Transcriptional corepressor SEUSS OS=Arabidopsis... 0.08 Archaeplastida
Solyc06g059760.3.1 No alias Transcriptional corepressor SEUSS OS=Arabidopsis... 0.1 Archaeplastida
Zm00001e011073_P001 No alias Transcriptional corepressor SEUSS OS=Arabidopsis... 0.04 Archaeplastida
Zm00001e018384_P001 No alias Transcriptional corepressor SEUSS OS=Arabidopsis... 0.02 Archaeplastida
Zm00001e021381_P001 No alias Transcriptional corepressor SEUSS OS=Arabidopsis... 0.05 Archaeplastida
Zm00001e029868_P001 No alias Probable transcriptional regulator SLK2 OS=Arabidopsis... 0.04 Archaeplastida
Zm00001e039584_P001 No alias Transcriptional corepressor SEUSS OS=Arabidopsis... 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Neighborhood
MF GO:0005096 GTPase activator activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
BP GO:0006366 transcription by RNA polymerase II IEP Neighborhood
BP GO:0006606 protein import into nucleus IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Neighborhood
BP GO:0006913 nucleocytoplasmic transport IEP Neighborhood
MF GO:0008047 enzyme activator activity IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
CC GO:0008287 protein serine/threonine phosphatase complex IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
MF GO:0015079 potassium ion transmembrane transporter activity IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
BP GO:0017038 protein import IEP Neighborhood
MF GO:0019208 phosphatase regulator activity IEP Neighborhood
MF GO:0019888 protein phosphatase regulator activity IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030127 COPII vesicle coat IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
MF GO:0030695 GTPase regulator activity IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0033365 protein localization to organelle IEP Neighborhood
MF GO:0034062 5'-3' RNA polymerase activity IEP Neighborhood
BP GO:0034504 protein localization to nucleus IEP Neighborhood
BP GO:0034613 cellular protein localization IEP Neighborhood
MF GO:0042393 histone binding IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
BP GO:0043631 RNA polyadenylation IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
BP GO:0051169 nuclear transport IEP Neighborhood
BP GO:0051170 import into nucleus IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
MF GO:0061608 nuclear import signal receptor activity IEP Neighborhood
MF GO:0070566 adenylyltransferase activity IEP Neighborhood
BP GO:0070727 cellular macromolecule localization IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
BP GO:0071804 cellular potassium ion transport IEP Neighborhood
BP GO:0071805 potassium ion transmembrane transport IEP Neighborhood
BP GO:0072594 establishment of protein localization to organelle IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
MF GO:0097747 RNA polymerase activity IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
MF GO:0140104 molecular carrier activity IEP Neighborhood
MF GO:0140142 nucleocytoplasmic carrier activity IEP Neighborhood
CC GO:1903293 phosphatase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR029005 LIM-bd/SEUSS 552 805
No external refs found!