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  5. Gb_28381

Gb_28381


Description : RING-HC-class E3 ligase


Gene families : OG0001188 (Archaeplastida) Phylogenetic Tree(s): OG0001188_tree ,
OG_05_0001068 (LandPlants) Phylogenetic Tree(s): OG_05_0001068_tree ,
OG_06_0000881 (SeedPlants) Phylogenetic Tree(s): OG_06_0000881_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_28381
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01010299001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.06 Archaeplastida
Solyc05g014230.3.1 No alias RING-HC-class E3 ligase 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006810 transport IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006820 anion transport IEP Neighborhood
BP GO:0006835 dicarboxylic acid transport IEP Neighborhood
BP GO:0006914 autophagy IEP Neighborhood
BP GO:0015711 organic anion transport IEP Neighborhood
BP GO:0015740 C4-dicarboxylate transport IEP Neighborhood
BP GO:0015743 malate transport IEP Neighborhood
BP GO:0015849 organic acid transport IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0046873 metal ion transmembrane transporter activity IEP Neighborhood
BP GO:0046942 carboxylic acid transport IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0061919 process utilizing autophagic mechanism IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!