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  5. Gb_28782

Gb_28782


Description : Putative UPF0481 protein At3g02645 OS=Arabidopsis thaliana (sp|p0c897|y3264_arath : 162.0)


Gene families : OG0000473 (Archaeplastida) Phylogenetic Tree(s): OG0000473_tree ,
OG_05_0000246 (LandPlants) Phylogenetic Tree(s): OG_05_0000246_tree ,
OG_06_0010308 (SeedPlants) Phylogenetic Tree(s): OG_06_0010308_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_28782
Cluster HCCA: Cluster_87

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01017510001 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis thaliana 0.04 Archaeplastida
Gb_07693 No alias no hits & (original description: none) 0.06 Archaeplastida
Gb_20970 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.05 Archaeplastida
Gb_34677 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10435738g0010 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.05 Archaeplastida
MA_155516g0010 No alias no hits & (original description: none) 0.08 Archaeplastida
MA_273399g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_8102365g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc06g068340.3.1 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e036342_P001 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
InterPro domains Description Start Stop
IPR004158 DUF247_pln 122 557
No external refs found!