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  5. Gb_28833

Gb_28833


Description : XRN4-exoribonuclease cofactor (LARP1)


Gene families : OG0001423 (Archaeplastida) Phylogenetic Tree(s): OG0001423_tree ,
OG_05_0001373 (LandPlants) Phylogenetic Tree(s): OG_05_0001373_tree ,
OG_06_0006521 (SeedPlants) Phylogenetic Tree(s): OG_06_0006521_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_28833
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00101p00028940 evm_27.TU.AmTr_v1... RNA processing.RNA decay.deadenylation-dependent... 0.03 Archaeplastida
GSVIVT01006333001 No alias La-related protein 1C OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01037494001 No alias RNA processing.RNA decay.deadenylation-dependent... 0.04 Archaeplastida
MA_113816g0010 No alias La-related protein 1A OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_1763g0010 No alias La-related protein 1A OS=Arabidopsis thaliana... 0.04 Archaeplastida
Pp3c11_24960V3.1 No alias LA RNA-binding protein 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term ression_networks">Networks Name Evidence Source
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005086 ARF guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0005984 disaccharide metabolic process IEP Neighborhood
BP GO:0005991 trehalose metabolic process IEP Neighborhood
BP GO:0005992 trehalose biosynthetic process IEP Neighborhood
MF GO:0008536 Ran GTPase binding IEP Neighborhood
BP GO:0009311 oligosaccharide metabolic process IEP Neighborhood
BP GO:0009312 oligosaccharide biosynthetic process IEP Neighborhood
BP GO:0009966 regulation of signal transduction IEP Neighborhood
BP GO:0010646 regulation of cell communication IEP Neighborhood
CC GO:0016459 myosin complex IEP Neighborhood
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
BP GO:0023051 regulation of signaling IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
BP GO:0032012 regulation of ARF protein signal transduction IEP Neighborhood
BP GO:0046351 disaccharide biosynthetic process IEP Neighborhood
BP GO:0046578 regulation of Ras protein signal transduction IEP Neighborhood
BP GO:0048583 regulation of response to stimulus IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Neighborhood
BP GO:1902531 regulation of intracellular signal transduction IEP Neighborhood
InterPro domains Description Start Stop
IPR006630 La_HTH 434 489
No external refs found!