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  5. Gb_29003

Gb_29003


Description : component RPL37 of LSU proteome component


Gene families : OG0002317 (Archaeplastida) Phylogenetic Tree(s): OG0002317_tree ,
OG_05_0002166 (LandPlants) Phylogenetic Tree(s): OG_05_0002166_tree ,
OG_06_0002211 (SeedPlants) Phylogenetic Tree(s): OG_06_0002211_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_29003
Cluster HCCA: Cluster_129

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00109p00029660 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.07 Archaeplastida
AT1G52300 No alias Zinc-binding ribosomal protein family protein 0.24 Archaeplastida
AT3G16080 No alias Zinc-binding ribosomal protein family protein 0.26 Archaeplastida
Cpa|evm.model.tig00020610.80 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.09 Archaeplastida
Cre10.g430400 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.27 Archaeplastida
GSVIVT01017081001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.25 Archaeplastida
GSVIVT01035677001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.09 Archaeplastida
LOC_Os02g56990.1 No alias component RPL37 of LSU proteome component 0.15 Archaeplastida
LOC_Os08g03450.1 No alias component RPL37 of LSU proteome component 0.13 Archaeplastida
MA_129829g0010 No alias component RPL37 of LSU proteome component 0.05 Archaeplastida
MA_741492g0010 No alias component RPL37 of LSU proteome component 0.05 Archaeplastida
Mp2g12400.1 No alias component RPL37 of LSU proteome component 0.1 Archaeplastida
Pp3c15_4370V3.1 No alias Zinc-binding ribosomal protein family protein 0.12 Archaeplastida
Pp3c18_13160V3.1 No alias Zinc-binding ribosomal protein family protein 0.25 Archaeplastida
Pp3c20_2550V3.1 No alias Zinc-binding ribosomal protein family protein 0.21 Archaeplastida
Pp3c21_9910V3.1 No alias Zinc-binding ribosomal protein family protein 0.16 Archaeplastida
Pp3c23_17260V3.1 No alias Zinc-binding ribosomal protein family protein 0.21 Archaeplastida
Pp3c9_8500V3.1 No alias Zinc-binding ribosomal protein family protein 0.14 Archaeplastida
Solyc03g120780.3.1 No alias component RPL37 of LSU proteome component 0.09 Archaeplastida
Solyc06g066660.4.1 No alias component RPL37 of LSU proteome component 0.22 Archaeplastida
Solyc08g068180.3.1 No alias component RPL37 of LSU proteome component 0.06 Archaeplastida
Zm00001e001908_P001 No alias component RPL37 of LSU proteome component 0.09 Archaeplastida
Zm00001e013434_P001 No alias component RPL37 of LSU proteome component 0.14 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005741 mitochondrial outer membrane IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
CC GO:0015934 large ribosomal subunit IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
CC GO:0031090 organelle membrane IEP Neighborhood
CC GO:0031966 mitochondrial membrane IEP Neighborhood
CC GO:0031968 organelle outer membrane IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
CC GO:0044391 ribosomal subunit IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
CC GO:0098588 bounding membrane of organelle IEP Neighborhood
CC GO:0098805 whole membrane IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!