Coexpression cluster: Cluster_129 (HCCA)

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0043228 non-membrane-bounded organelle 38.46% (35/91) 6.25 0.0 0.0
GO:1901566 organonitrogen compound biosynthetic process 40.66% (37/91) 5.33 0.0 0.0
GO:0043604 amide biosynthetic process 40.66% (37/91) 6.36 0.0 0.0
GO:0043603 cellular amide metabolic process 40.66% (37/91) 6.3 0.0 0.0
GO:0043232 intracellular non-membrane-bounded organelle 38.46% (35/91) 6.25 0.0 0.0
GO:0034645 cellular macromolecule biosynthetic process 40.66% (37/91) 5.57 0.0 0.0
GO:0043043 peptide biosynthetic process 40.66% (37/91) 6.44 0.0 0.0
GO:0043229 intracellular organelle 38.46% (35/91) 5.28 0.0 0.0
GO:0043226 organelle 38.46% (35/91) 5.28 0.0 0.0
GO:0009059 macromolecule biosynthetic process 40.66% (37/91) 5.4 0.0 0.0
GO:0044444 cytoplasmic part 40.66% (37/91) 5.52 0.0 0.0
GO:0005840 ribosome 38.46% (35/91) 6.43 0.0 0.0
GO:1990904 ribonucleoprotein complex 41.76% (38/91) 6.33 0.0 0.0
GO:0044271 cellular nitrogen compound biosynthetic process 40.66% (37/91) 5.15 0.0 0.0
GO:0006518 peptide metabolic process 40.66% (37/91) 6.39 0.0 0.0
GO:0006412 translation 40.66% (37/91) 6.46 0.0 0.0
GO:0003735 structural constituent of ribosome 40.66% (37/91) 6.44 0.0 0.0
GO:0005198 structural molecule activity 40.66% (37/91) 6.31 0.0 0.0
GO:0032991 protein-containing complex 41.76% (38/91) 4.81 0.0 0.0
GO:0044249 cellular biosynthetic process 40.66% (37/91) 4.43 0.0 0.0
GO:1901576 organic substance biosynthetic process 40.66% (37/91) 4.36 0.0 0.0
GO:0044424 intracellular part 40.66% (37/91) 4.23 0.0 0.0
GO:0009058 biosynthetic process 40.66% (37/91) 4.22 0.0 0.0
GO:0044464 cell part 40.66% (37/91) 4.13 0.0 0.0
GO:0034641 cellular nitrogen compound metabolic process 40.66% (37/91) 3.97 0.0 0.0
GO:0044267 cellular protein metabolic process 40.66% (37/91) 3.48 0.0 0.0
GO:0019538 protein metabolic process 40.66% (37/91) 3.27 0.0 0.0
GO:0005575 cellular_component 42.86% (39/91) 3.01 0.0 0.0
GO:0044260 cellular macromolecule metabolic process 40.66% (37/91) 3.01 0.0 0.0
GO:1901564 organonitrogen compound metabolic process 40.66% (37/91) 2.97 0.0 0.0
GO:0043170 macromolecule metabolic process 40.66% (37/91) 2.74 0.0 0.0
GO:0006807 nitrogen compound metabolic process 40.66% (37/91) 2.6 0.0 0.0
GO:0044237 cellular metabolic process 40.66% (37/91) 2.47 0.0 0.0
GO:0044238 primary metabolic process 40.66% (37/91) 2.29 0.0 0.0
GO:0071704 organic substance metabolic process 40.66% (37/91) 2.23 0.0 0.0
GO:0009987 cellular process 40.66% (37/91) 2.2 0.0 0.0
GO:0008152 metabolic process 40.66% (37/91) 1.74 0.0 0.0
GO:0008150 biological_process 40.66% (37/91) 1.23 0.0 0.0
GO:0044391 ribosomal subunit 2.2% (2/91) 8.83 5e-06 7e-06
GO:0015934 large ribosomal subunit 2.2% (2/91) 8.83 5e-06 7e-06
GO:0003674 molecular_function 47.25% (43/91) 0.78 5e-05 7.3e-05
GO:0003676 nucleic acid binding 8.79% (8/91) 1.43 0.00979 0.013986
GO:0032040 small-subunit processome 1.1% (1/91) 6.24 0.013146 0.018343
GO:0019843 rRNA binding 1.1% (1/91) 5.5 0.021814 0.028453
GO:0030684 preribosome 1.1% (1/91) 5.5 0.021814 0.028453
GO:0003723 RNA binding 3.3% (3/91) 2.36 0.021169 0.028866
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_39 0.06 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_44 0.022 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_53 0.158 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_122 0.029 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_134 0.192 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_207 0.099 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_50 0.144 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_129 0.04 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_160 0.048 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_210 0.023 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_242 0.031 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_15 0.236 Archaeplastida Compare
Gingko biloba HCCA Cluster_29 0.022 Archaeplastida Compare
Gingko biloba HCCA Cluster_152 0.023 Archaeplastida Compare
Gingko biloba HCCA Cluster_323 0.038 Archaeplastida Compare
Gingko biloba HCCA Cluster_335 0.021 Archaeplastida Compare
Zea mays HCCA Cluster_122 0.059 Archaeplastida Compare
Zea mays HCCA Cluster_137 0.279 Archaeplastida Compare
Zea mays HCCA Cluster_275 0.029 Archaeplastida Compare
Zea mays HCCA Cluster_276 0.029 Archaeplastida Compare
Zea mays HCCA Cluster_350 0.05 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_36 0.239 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_94 0.025 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_119 0.029 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_28 0.222 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_121 0.019 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_124 0.117 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_155 0.035 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_192 0.179 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_248 0.144 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_252 0.031 Archaeplastida Compare
Picea abies HCCA Cluster_84 0.04 Archaeplastida Compare
Picea abies HCCA Cluster_90 0.028 Archaeplastida Compare
Picea abies HCCA Cluster_181 0.021 Archaeplastida Compare
Picea abies HCCA Cluster_208 0.168 Archaeplastida Compare
Picea abies HCCA Cluster_261 0.028 Archaeplastida Compare
Picea abies HCCA Cluster_296 0.079 Archaeplastida Compare
Picea abies HCCA Cluster_339 0.03 Archaeplastida Compare
Picea abies HCCA Cluster_423 0.021 Archaeplastida Compare
Oryza sativa HCCA Cluster_109 0.038 Archaeplastida Compare
Oryza sativa HCCA Cluster_140 0.234 Archaeplastida Compare
Oryza sativa HCCA Cluster_212 0.026 Archaeplastida Compare
Oryza sativa HCCA Cluster_333 0.022 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_88 0.038 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_90 0.079 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_113 0.098 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_148 0.031 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_180 0.05 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_86 0.223 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_105 0.024 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_142 0.089 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_155 0.024 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_207 0.042 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_222 0.147 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_243 0.027 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_251 0.038 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_265 0.053 Archaeplastida Compare
Vitis vinifera HCCA Cluster_22 0.12 Archaeplastida Compare
Vitis vinifera HCCA Cluster_60 0.067 Archaeplastida Compare
Vitis vinifera HCCA Cluster_69 0.207 Archaeplastida Compare
Vitis vinifera HCCA Cluster_132 0.029 Archaeplastida Compare
Vitis vinifera HCCA Cluster_172 0.081 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_35 0.124 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_100 0.18 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_118 0.023 Archaeplastida Compare
Sequences (91) (download table)

InterPro Domains

GO Terms

Family Terms