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Gb_29411


Description : S-adenosyl methionine synthetase


Gene families : OG0001150 (Archaeplastida) Phylogenetic Tree(s): OG0001150_tree ,
OG_05_0001057 (LandPlants) Phylogenetic Tree(s): OG_05_0001057_tree ,
OG_06_0001134 (SeedPlants) Phylogenetic Tree(s): OG_06_0001134_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_29411
Cluster HCCA: Cluster_157

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00073480 evm_27.TU.AmTr_v1... Coenzyme metabolism.S-adenosyl methionine (SAM)... 0.03 Archaeplastida
AT1G02500 MAT1, AtSAM1, SAM1, SAM-1 S-adenosylmethionine synthetase 1 0.07 Archaeplastida
AT2G36880 MAT3 methionine adenosyltransferase 3 0.05 Archaeplastida
AT4G01850 SAM2, MAT2, AtSAM2, SAM-2 S-adenosylmethionine synthetase 2 0.1 Archaeplastida
LOC_Os05g04510.1 No alias S-adenosyl methionine synthetase 0.04 Archaeplastida
MA_197296g0010 No alias S-adenosyl methionine synthetase 0.04 Archaeplastida
Mp8g03230.1 No alias S-adenosyl methionine synthetase 0.02 Archaeplastida
Smo155092 No alias Coenzyme metabolism.S-adenosyl methionine (SAM)... 0.04 Archaeplastida
Smo168213 No alias Coenzyme metabolism.S-adenosyl methionine (SAM)... 0.03 Archaeplastida
Zm00001e026226_P001 No alias S-adenosyl methionine synthetase 0.04 Archaeplastida
Zm00001e027541_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e040353_P003 No alias S-adenosyl methionine synthetase 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004478 methionine adenosyltransferase activity IEA Interproscan
BP GO:0006556 S-adenosylmethionine biosynthetic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Neighborhood
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0004519 endonuclease activity IEP Neighborhood
MF GO:0004521 endoribonuclease activity IEP Neighborhood
MF GO:0004540 ribonuclease activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004568 chitinase activity IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
BP GO:0006022 aminoglycan metabolic process IEP Neighborhood
BP GO:0006026 aminoglycan catabolic process IEP Neighborhood
BP GO:0006030 chitin metabolic process IEP Neighborhood
BP GO:0006032 chitin catabolic process IEP Neighborhood
BP GO:0006040 amino sugar metabolic process IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0009072 aromatic amino acid family metabolic process IEP Neighborhood
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Neighborhood
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Neighborhood
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0033897 ribonuclease T2 activity IEP Neighborhood
BP GO:0042737 drug catabolic process IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
BP GO:0046348 amino sugar catabolic process IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
BP GO:1901071 glucosamine-containing compound metabolic process IEP Neighborhood
BP GO:1901072 glucosamine-containing compound catabolic process IEP Neighborhood
BP GO:1901135 carbohydrate derivative metabolic process IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood
BP GO:1901575 organic substance catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR022629 S-AdoMet_synt_central 117 238
IPR022628 S-AdoMet_synt_N 4 101
IPR022630 S-AdoMet_synt_C 240 381
No external refs found!