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  5. Gb_29488

Gb_29488


Description : transcription factor (PLATZ)


Gene families : OG0000197 (Archaeplastida) Phylogenetic Tree(s): OG0000197_tree ,
OG_05_0000880 (LandPlants) Phylogenetic Tree(s): OG_05_0000880_tree ,
OG_06_0027337 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_29488
Cluster HCCA: Cluster_113

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00208550 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.PLATZ... 0.02 Archaeplastida
AT1G43000 No alias PLATZ transcription factor family protein 0.02 Archaeplastida
GSVIVT01012125001 No alias RNA biosynthesis.transcriptional activation.PLATZ... 0.03 Archaeplastida
GSVIVT01012869001 No alias RNA biosynthesis.transcriptional activation.PLATZ... 0.03 Archaeplastida
GSVIVT01031446001 No alias RNA biosynthesis.transcriptional activation.PLATZ... 0.02 Archaeplastida
GSVIVT01033703001 No alias RNA biosynthesis.transcriptional activation.PLATZ... 0.03 Archaeplastida
LOC_Os01g33370.1 No alias transcription factor (PLATZ) 0.02 Archaeplastida
LOC_Os02g46610.1 No alias transcription factor (PLATZ) 0.02 Archaeplastida
LOC_Os04g50120.1 No alias transcription factor (PLATZ) 0.03 Archaeplastida
LOC_Os06g41930.2 No alias transcription factor (PLATZ) 0.03 Archaeplastida
Pp3c15_23190V3.1 No alias PLATZ transcription factor family protein 0.02 Archaeplastida
Smo425306 No alias RNA biosynthesis.transcriptional activation.PLATZ... 0.03 Archaeplastida
Solyc01g091000.4.1 No alias transcription factor (PLATZ) 0.03 Archaeplastida
Zm00001e002426_P001 No alias transcription factor (PLATZ) 0.03 Archaeplastida
Zm00001e007100_P003 No alias transcription factor (PLATZ) 0.03 Archaeplastida
Zm00001e013748_P001 No alias transcription factor (PLATZ) 0.02 Archaeplastida
Zm00001e013865_P001 No alias transcription factor (PLATZ) 0.02 Archaeplastida
Zm00001e041404_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0005543 phospholipid binding IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR006734 DUF597 67 138
No external refs found!