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  5. Gb_29933

Gb_29933


Description : transcription factor (MYB)


Gene families : OG0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000002 (LandPlants) Phylogenetic Tree(s): OG_05_0000002_tree ,
OG_06_0000006 (SeedPlants) Phylogenetic Tree(s): OG_06_0000006_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_29933
Cluster HCCA: Cluster_144

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00272410 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00006p00225600 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00010p00261750 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00024p00224470 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00024p00225650 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
AMTR_s00030p00146410 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
AMTR_s00045p00146180 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00076p00157170 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00096p00076220 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00133p00071910 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00186p00015620 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.06 Archaeplastida
AT1G14350 AtMYB124, MYB124, FLP Duplicated homeodomain-like superfamily protein 0.05 Archaeplastida
AT1G16490 MYB58, ATMYB58 myb domain protein 58 0.02 Archaeplastida
AT1G25340 MYB116, AtMYB116 myb domain protein 116 0.02 Archaeplastida
AT1G26780 AtMYB117, LOF1, MYB117 myb domain protein 117 0.06 Archaeplastida
AT1G68320 BW62B, BW62C,... myb domain protein 62 0.02 Archaeplastida
AT1G69560 LOF2, MYB105, ATMYB105 myb domain protein 105 0.03 Archaeplastida
AT2G47190 MYB2, ATMYB2 myb domain protein 2 0.03 Archaeplastida
AT3G01140 MYB106, NOK, AtMYB106 myb domain protein 106 0.02 Archaeplastida
AT3G01530 MYB57, ATMYB57 myb domain protein 57 0.02 Archaeplastida
AT3G08500 AtMYB83, MYB83 myb domain protein 83 0.02 Archaeplastida
AT3G27785 PGA37, ATMYB118, MYB118 myb domain protein 118 0.02 Archaeplastida
AT3G27810 ATMYB21, MYB21, ATMYB3 myb domain protein 21 0.03 Archaeplastida
AT3G27920 ATMYB0, ATGL1, GL1, MYB0 myb domain protein 0 0.04 Archaeplastida
AT3G28470 ATMYB35, TDF1 Duplicated homeodomain-like superfamily protein 0.03 Archaeplastida
AT3G48920 MYB45, AtMYB45 myb domain protein 45 0.04 Archaeplastida
AT3G49690 MYB84, RAX3, ATMYB84 myb domain protein 84 0.03 Archaeplastida
AT3G61250 AtMYB17, MYB17 myb domain protein 17 0.05 Archaeplastida
AT4G28110 MYB41, AtMYB41 myb domain protein 41 0.03 Archaeplastida
AT5G02320 ATMYB3R5, MYB3R-5 myb domain protein 3r-5 0.02 Archaeplastida
AT5G16770 MYB9, AtMYB9 myb domain protein 9 0.03 Archaeplastida
AT5G23000 MYB37, RAX1, ATMYB37 myb domain protein 37 0.05 Archaeplastida
AT5G40330 ATMYBRTF, ATMYB23, MYB23 myb domain protein 23 0.04 Archaeplastida
AT5G40350 MYB24, AtMYB24 myb domain protein 24 0.03 Archaeplastida
AT5G40360 MYB115, AtMYB115 myb domain protein 115 0.03 Archaeplastida
AT5G52600 AtMYB82, MYB82 myb domain protein 82 0.06 Archaeplastida
AT5G56110 MYB103,... myb domain protein 103 0.02 Archaeplastida
AT5G60890 MYB34, ATMYB34, ATR1 myb domain protein 34 0.04 Archaeplastida
AT5G62320 ATMYB99, ATMYBCU15, MYB99 myb domain protein 99 0.03 Archaeplastida
GSVIVT01004851001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01008090001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01008484001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01009032001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01009566001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.09 Archaeplastida
GSVIVT01010086001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01011447001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01013126001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01013735001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.06 Archaeplastida
GSVIVT01014454001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01014770001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01015264001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01015575001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
GSVIVT01019410001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01024353001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01025034001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01026868001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01028235001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01030708001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01031341001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01034943001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01035177001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01035332001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Gb_02020 No alias transcription factor (MYB) 0.04 Archaeplastida
Gb_03227 No alias transcription factor (MYB) 0.06 Archaeplastida
Gb_19333 No alias transcription factor (MYB) 0.04 Archaeplastida
Gb_24073 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_29789 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_32143 No alias transcription factor (MYB) 0.04 Archaeplastida
Gb_35820 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_39081 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os01g16810.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os01g36460.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os01g45090.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os01g52410.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os01g74590.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os02g42870.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os03g04900.1 No alias transcription factor (MYB) 0.05 Archaeplastida
LOC_Os04g43680.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os05g28320.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os05g48010.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os06g14670.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os06g43090.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os07g31470.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os07g43580.1 No alias transcription factor (MYB) 0.06 Archaeplastida
LOC_Os08g33940.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os09g36250.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os10g33810.1 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_10157944g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_10431610g0040 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_10433651g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_117992g0010 No alias transcription factor (MYB) 0.05 Archaeplastida
MA_128871g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_136123g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_140579g0010 No alias transcription factor (MYB) 0.06 Archaeplastida
MA_14204g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_15687g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_16413g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_173523g0010 No alias transcription factor (MYB) 0.06 Archaeplastida
MA_17672g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_190973g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_24271g0020 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_246142g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_37256g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_45091g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_492415g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_52293g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_53373g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_6277697g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_79447g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_8206949g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_89624g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_948059g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_9818613g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
Mp2g22560.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Mp5g13060.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Mp5g22280.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Pp3c12_10360V3.1 No alias myb domain protein 105 0.03 Archaeplastida
Pp3c14_14030V3.1 No alias Homeodomain-like protein 0.03 Archaeplastida
Pp3c15_7790V3.1 No alias myb domain protein 55 0.03 Archaeplastida
Pp3c17_7730V3.1 No alias myb domain protein 55 0.02 Archaeplastida
Pp3c1_1650V3.1 No alias myb domain protein 105 0.03 Archaeplastida
Pp3c1_4970V3.1 No alias myb domain protein 106 0.03 Archaeplastida
Pp3c20_8950V3.1 No alias myb domain protein r1 0.02 Archaeplastida
Pp3c24_11770V3.1 No alias No annotation 0.02 Archaeplastida
Pp3c25_3170V3.1 No alias myb domain protein 16 0.02 Archaeplastida
Pp3c6_9970V3.1 No alias myb domain protein 106 0.02 Archaeplastida
Pp3c7_23490V3.1 No alias myb domain protein 106 0.03 Archaeplastida
Pp3c9_10290V3.1 No alias myb domain protein 55 0.02 Archaeplastida
Smo6091 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Smo80553 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Solyc01g057910.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc01g094360.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc02g091980.2.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc02g093740.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc03g025870.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc03g059200.2.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc03g113530.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc03g116100.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc03g119370.2.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc04g056310.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc05g007690.2.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc05g007710.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc05g007870.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc05g014290.4.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc05g048830.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc06g074910.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc07g006750.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc07g008010.4.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc07g053230.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc10g005460.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc10g005760.3.1 No alias transcription factor (MYB). transcriptional key... 0.02 Archaeplastida
Solyc10g008700.3.1 No alias No annotation 0.02 Archaeplastida
Solyc12g008670.2.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e001341_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e001803_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e004140_P002 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e004164_P002 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e007085_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e007422_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e009453_P002 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e015125_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e015239_P001 No alias transcription factor (MYB) 0.05 Archaeplastida
Zm00001e016583_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e017496_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e018415_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e020004_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e020044_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e023100_P001 No alias transcription factor (MYB) 0.06 Archaeplastida
Zm00001e023733_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e025867_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e026426_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e027003_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e028135_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e029816_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e031799_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e034072_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e036684_P002 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e037510_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e037956_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e038356_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e041055_P001 No alias transcription factor (MYB). transcriptional key... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 14 61
No external refs found!