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Gb_29994


Description : Endochitinase A OS=Zea mays (sp|p29022|chia_maize : 88.6)


Gene families : OG0000104 (Archaeplastida) Phylogenetic Tree(s): OG0000104_tree ,
OG_05_0002685 (LandPlants) Phylogenetic Tree(s): OG_05_0002685_tree ,
OG_06_0002471 (SeedPlants) Phylogenetic Tree(s): OG_06_0002471_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_29994
Cluster HCCA: Cluster_186

Target Alias Description ECC score Gene Family Method Actions
AT2G43570 CHI chitinase, putative 0.03 Archaeplastida
AT3G47540 No alias Chitinase family protein 0.02 Archaeplastida
GSVIVT01035029001 No alias Cell wall.cellulose.synthesis.cellulose microfibrils and... 0.03 Archaeplastida
GSVIVT01038120001 No alias Endochitinase EP3 OS=Arabidopsis thaliana 0.02 Archaeplastida
Gb_07463 No alias Chitinase 4 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Gb_14113 No alias Endochitinase A2 OS=Pisum sativum (sp|p21226|chi2_pea : 297.0) 0.03 Archaeplastida
Gb_29991 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Gb_29992 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Gb_34558 No alias Chitinase 6 OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
LOC_Os04g41620.1 No alias Chitinase 4 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os04g41680.1 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os06g51060.1 No alias Chitinase 1 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
LOC_Os08g41100.1 No alias CTL cellulose microfibrils and hemicellulose interaction protein 0.02 Archaeplastida
MA_114934g0010 No alias Chitinase 4 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
MA_18470g0020 No alias Endochitinase A2 OS=Pisum sativum (sp|p21226|chi2_pea : 201.0) 0.02 Archaeplastida
MA_295712g0010 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
MA_9682123g0010 No alias Chitinase 4 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Pp3c13_4480V3.1 No alias Chitinase family protein 0.03 Archaeplastida
Solyc02g082930.3.1 No alias Acidic 27 kDa endochitinase OS=Solanum lycopersicum... 0.02 Archaeplastida
Solyc04g072000.4.1 No alias Endochitinase EP3 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Solyc10g055800.2.1 No alias Basic 30 kDa endochitinase OS=Solanum lycopersicum... 0.05 Archaeplastida
Solyc10g055810.2.1 No alias Basic 30 kDa endochitinase OS=Solanum lycopersicum... 0.04 Archaeplastida
Solyc12g098810.2.1 No alias CTL cellulose microfibrils and hemicellulose interaction protein 0.02 Archaeplastida
Zm00001e007715_P001 No alias Endochitinase A OS=Zea mays (sp|p29022|chia_maize : 330.0) 0.02 Archaeplastida
Zm00001e027534_P001 No alias Chitinase 10 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEA Interproscan
BP GO:0006032 chitin catabolic process IEA Interproscan
MF GO:0008061 chitin binding IEA Interproscan
BP GO:0016998 cell wall macromolecule catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0015276 ligand-gated ion channel activity IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
MF GO:0022834 ligand-gated channel activity IEP Neighborhood
MF GO:0022836 gated channel activity IEP Neighborhood
MF GO:0022839 ion gated channel activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001002 Chitin-bd_1 34 65
IPR000726 Glyco_hydro_19_cat 83 118
No external refs found!