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AT2G43490


Description : Ypt/Rab-GAP domain of gyp1p superfamily protein


Gene families : OG0001337 (Archaeplastida) Phylogenetic Tree(s): OG0001337_tree ,
OG_05_0006705 (LandPlants) Phylogenetic Tree(s): OG_05_0006705_tree ,
OG_06_0005514 (SeedPlants) Phylogenetic Tree(s): OG_06_0005514_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G43490
Cluster HCCA: Cluster_173

Target Alias Description ECC score Gene Family Method Actions
AT4G27100 No alias Ypt/Rab-GAP domain of gyp1p superfamily protein 0.05 Archaeplastida
Gb_35832 No alias RAB-GTPase-activating protein (RAB-GAP) 0.02 Archaeplastida
Solyc07g064230.4.1 No alias RAB-GTPase-activating protein (RAB-GAP) 0.05 Archaeplastida
Solyc10g006440.3.1 No alias RAB-GTPase-activating protein (RAB-GAP) 0.02 Archaeplastida
Zm00001e010495_P001 No alias RAB-GTPase-activating protein (RAB-GAP) 0.02 Archaeplastida
Zm00001e035132_P001 No alias RAB-GTPase-activating protein (RAB-GAP) 0.02 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005794 Golgi apparatus ISM Interproscan
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Type GO Term Name Evidence Source
BP GO:0000003 reproduction IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0003690 double-stranded DNA binding IEP Neighborhood
MF GO:0003725 double-stranded RNA binding IEP Neighborhood
MF GO:0003983 UTP:glucose-1-phosphate uridylyltransferase activity IEP Neighborhood
MF GO:0004647 phosphoserine phosphatase activity IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005086 ARF guanyl-nucleotide exchange factor activity IEP Neighborhood
BP GO:0005985 sucrose metabolic process IEP Neighborhood
BP GO:0007059 chromosome segregation IEP Neighborhood
BP GO:0007062 sister chromatid cohesion IEP Neighborhood
BP GO:0008284 positive regulation of cell proliferation IEP Neighborhood
MF GO:0008536 Ran GTPase binding IEP Neighborhood
CC GO:0009330 DNA topoisomerase complex (ATP-hydrolyzing) IEP Neighborhood
BP GO:0009890 negative regulation of biosynthetic process IEP Neighborhood
BP GO:0009913 epidermal cell differentiation IEP Neighborhood
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
BP GO:0030154 cell differentiation IEP Neighborhood
BP GO:0030307 positive regulation of cell growth IEP Neighborhood
BP GO:0030855 epithelial cell differentiation IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
BP GO:0031324 negative regulation of cellular metabolic process IEP Neighborhood
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Neighborhood
CC GO:0042995 cell projection IEP Neighborhood
BP GO:0045132 meiotic chromosome segregation IEP Neighborhood
BP GO:0045892 negative regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0045927 positive regulation of growth IEP Neighborhood
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0048235 pollen sperm cell differentiation IEP Neighborhood
BP GO:0050790 regulation of catalytic activity IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051253 negative regulation of RNA metabolic process IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
MF GO:0051748 UTP-monosaccharide-1-phosphate uridylyltransferase activity IEP Neighborhood
BP GO:0052386 cell wall thickening IEP Neighborhood
BP GO:0052543 callose deposition in cell wall IEP Neighborhood
BP GO:0065009 regulation of molecular function IEP Neighborhood
MF GO:0070569 uridylyltransferase activity IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
CC GO:0090406 pollen tube IEP Neighborhood
BP GO:0098813 nuclear chromosome segregation IEP Neighborhood
CC GO:0120025 plasma membrane bounded cell projection IEP Neighborhood
BP GO:1902679 negative regulation of RNA biosynthetic process IEP Neighborhood
BP GO:1903046 meiotic cell cycle process IEP Neighborhood
BP GO:1903507 negative regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000195 Rab-GTPase-TBC_dom 358 504
No external refs found!