Gb_31243

Description : cyclic nucleotide-gated cation channel (CNGC)

Gene families : OG0000137 (Archaeplastida) Phylogenetic Tree(s): OG0000137_tree ,
OG_05_0000296 (LandPlants) Phylogenetic Tree(s): OG_05_0000296_tree ,
OG_06_0001368 (SeedPlants) Phylogenetic Tree(s): OG_06_0001368_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_31243
Cluster	HCCA: Cluster_334

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00053p00015490	evm_27.TU.AmTr_v1...	Solute transport.channels.VIC superfamily.cyclic...	0.04	Archaeplastida
AT1G15990	CNGC7, ATCNGC7	cyclic nucleotide gated channel 7	0.03	Archaeplastida
AT5G53130	ATCNGC1, CNGC1	cyclic nucleotide gated channel 1	0.03	Archaeplastida
AT5G57940	CNGC5, ATCNGC5	cyclic nucleotide gated channel 5	0.03	Archaeplastida
GSVIVT01029407001	No alias	Solute transport.channels.VIC superfamily.cyclic...	0.03	Archaeplastida
LOC_Os02g54760.1	No alias	cyclic nucleotide-gated cation channel (CNGC)	0.02	Archaeplastida
LOC_Os04g55080.1	No alias	cyclic nucleotide-gated cation channel (CNGC)	0.02	Archaeplastida
LOC_Os06g08850.1	No alias	cyclic nucleotide-gated cation channel (CNGC)	0.04	Archaeplastida
LOC_Os09g38580.1	No alias	cyclic nucleotide-gated cation channel (CNGC)	0.02	Archaeplastida
Smo113786	No alias	Solute transport.channels.VIC superfamily.cyclic...	0.05	Archaeplastida
Solyc07g006510.3.1	No alias	cyclic nucleotide-gated cation channel (CNGC)	0.03	Archaeplastida
Solyc12g010010.2.1	No alias	cyclic nucleotide-gated cation channel (CNGC)	0.05	Archaeplastida
Zm00001e006772_P003	No alias	cyclic nucleotide-gated cation channel (CNGC)	0.04	Archaeplastida
Zm00001e030701_P001	No alias	cyclic nucleotide-gated cation channel (CNGC)	0.04	Archaeplastida
Zm00001e034885_P002	No alias	cyclic nucleotide-gated cation channel (CNGC)	0.02	Archaeplastida
Zm00001e036286_P001	No alias	cyclic nucleotide-gated cation channel (CNGC)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005216	ion channel activity	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	ion transport	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
MF	GO:0015075	ion transmembrane transporter activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022838	substrate-specific channel activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan

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Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEP	Neighborhood
BP	GO:0000272	polysaccharide catabolic process	IEP	Neighborhood
MF	GO:0004645	phosphorylase activity	IEP	Neighborhood
MF	GO:0005047	signal recognition particle binding	IEP	Neighborhood
MF	GO:0005488	binding	IEP	Neighborhood
MF	GO:0005515	protein binding	IEP	Neighborhood
MF	GO:0005543	phospholipid binding	IEP	Neighborhood
CC	GO:0005785	signal recognition particle receptor complex	IEP	Neighborhood
BP	GO:0006605	protein targeting	IEP	Neighborhood
BP	GO:0006612	protein targeting to membrane	IEP	Neighborhood
BP	GO:0006613	cotranslational protein targeting to membrane	IEP	Neighborhood
BP	GO:0006614	SRP-dependent cotranslational protein targeting to membrane	IEP	Neighborhood
BP	GO:0006886	intracellular protein transport	IEP	Neighborhood
BP	GO:0007165	signal transduction	IEP	Neighborhood
BP	GO:0008104	protein localization	IEP	Neighborhood
MF	GO:0008184	glycogen phosphorylase activity	IEP	Neighborhood
MF	GO:0008289	lipid binding	IEP	Neighborhood
BP	GO:0015031	protein transport	IEP	Neighborhood
BP	GO:0015833	peptide transport	IEP	Neighborhood
MF	GO:0016160	amylase activity	IEP	Neighborhood
MF	GO:0016161	beta-amylase activity	IEP	Neighborhood
MF	GO:0016409	palmitoyltransferase activity	IEP	Neighborhood
BP	GO:0033036	macromolecule localization	IEP	Neighborhood
BP	GO:0033365	protein localization to organelle	IEP	Neighborhood
BP	GO:0034613	cellular protein localization	IEP	Neighborhood
MF	GO:0035091	phosphatidylinositol binding	IEP	Neighborhood
BP	GO:0035556	intracellular signal transduction	IEP	Neighborhood
BP	GO:0042886	amide transport	IEP	Neighborhood
MF	GO:0043021	ribonucleoprotein complex binding	IEP	Neighborhood
CC	GO:0044432	endoplasmic reticulum part	IEP	Neighborhood
MF	GO:0044877	protein-containing complex binding	IEP	Neighborhood
BP	GO:0045047	protein targeting to ER	IEP	Neighborhood
BP	GO:0045184	establishment of protein localization	IEP	Neighborhood
BP	GO:0046907	intracellular transport	IEP	Neighborhood
BP	GO:0051641	cellular localization	IEP	Neighborhood
BP	GO:0051649	establishment of localization in cell	IEP	Neighborhood
BP	GO:0070727	cellular macromolecule localization	IEP	Neighborhood
BP	GO:0070972	protein localization to endoplasmic reticulum	IEP	Neighborhood
BP	GO:0071702	organic substance transport	IEP	Neighborhood
BP	GO:0071705	nitrogen compound transport	IEP	Neighborhood
BP	GO:0072594	establishment of protein localization to organelle	IEP	Neighborhood
BP	GO:0072599	establishment of protein localization to endoplasmic reticulum	IEP	Neighborhood
BP	GO:0072657	protein localization to membrane	IEP	Neighborhood
BP	GO:0090150	establishment of protein localization to membrane	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000595	cNMP-bd_dom	512	600
IPR005821	Ion_trans_dom	85	416

External Links

No external refs found!

Gb_31243

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation