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Gb_31285


Description : Pumilio homolog 2 OS=Arabidopsis thaliana (sp|q9zw06|pum2_arath : 301.0)


Gene families : OG0000536 (Archaeplastida) Phylogenetic Tree(s): OG0000536_tree ,
OG_05_0000342 (LandPlants) Phylogenetic Tree(s): OG_05_0000342_tree ,
OG_06_0000990 (SeedPlants) Phylogenetic Tree(s): OG_06_0000990_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_31285
Cluster HCCA: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
AT2G29190 APUM2, PUM2 pumilio 2 0.02 Archaeplastida
GSVIVT01024918001 No alias Pumilio homolog 1 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01029553001 No alias Pumilio homolog 5 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01031557001 No alias Pumilio homolog 5 OS=Arabidopsis thaliana 0.04 Archaeplastida
MA_10434828g0010 No alias Pumilio homolog 2 OS=Arabidopsis thaliana... 0.06 Archaeplastida
MA_12280g0010 No alias Pumilio homolog 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_42218g0010 No alias Pumilio homolog 1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_6588g0010 No alias Pumilio homolog 3 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Pp3c3_36960V3.1 No alias pumilio 1 0.02 Archaeplastida
Pp3c8_2770V3.1 No alias pumilio 1 0.05 Archaeplastida
Pp3c8_3320V3.1 No alias pumilio 1 0.02 Archaeplastida
Smo1983 No alias Pumilio homolog 1 OS=Arabidopsis thaliana 0.03 Archaeplastida
Smo86145 No alias Pumilio homolog 1 OS=Arabidopsis thaliana 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0004402 histone acetyltransferase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006473 protein acetylation IEP Neighborhood
BP GO:0006475 internal protein amino acid acetylation IEP Neighborhood
MF GO:0008080 N-acetyltransferase activity IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
MF GO:0016407 acetyltransferase activity IEP Neighborhood
MF GO:0016410 N-acyltransferase activity IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016573 histone acetylation IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
BP GO:0018393 internal peptidyl-lysine acetylation IEP Neighborhood
BP GO:0018394 peptidyl-lysine acetylation IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
MF GO:0034212 peptide N-acetyltransferase activity IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0043543 protein acylation IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR012940 NABP 336 733
No external refs found!