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  5. Gb_31397

Gb_31397


Description : villin actin-crosslinking factor


Gene families : OG0000669 (Archaeplastida) Phylogenetic Tree(s): OG0000669_tree ,
OG_05_0000929 (LandPlants) Phylogenetic Tree(s): OG_05_0000929_tree ,
OG_06_0004024 (SeedPlants) Phylogenetic Tree(s): OG_06_0004024_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_31397
Cluster HCCA: Cluster_333

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00248490 evm_27.TU.AmTr_v1... Cytoskeleton.microfilament network.actin... 0.03 Archaeplastida
AT2G41740 ATVLN2, VLN2 villin 2 0.05 Archaeplastida
Cre12.g524400 No alias No description available 0.02 Archaeplastida
GSVIVT01033261001 No alias Cytoskeleton.microfilament network.actin... 0.03 Archaeplastida
LOC_Os06g44890.1 No alias villin actin-crosslinking factor 0.02 Archaeplastida
MA_10429481g0030 No alias villin actin-crosslinking factor 0.03 Archaeplastida
MA_10430359g0030 No alias Villin-2 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
MA_10430359g0040 No alias villin actin-crosslinking factor 0.04 Archaeplastida
Solyc02g021420.3.1 No alias villin actin-crosslinking factor 0.03 Archaeplastida
Solyc10g079400.3.1 No alias villin actin-crosslinking factor 0.03 Archaeplastida
Zm00001e010507_P006 No alias villin actin-crosslinking factor 0.03 Archaeplastida
Zm00001e028314_P001 No alias villin actin-crosslinking factor 0.03 Archaeplastida
Zm00001e031068_P001 No alias villin actin-crosslinking factor 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEA Interproscan
BP GO:0007010 cytoskeleton organization IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Neighborhood
MF GO:0004559 alpha-mannosidase activity IEP Neighborhood
MF GO:0005096 GTPase activator activity IEP Neighborhood
BP GO:0005996 monosaccharide metabolic process IEP Neighborhood
BP GO:0006013 mannose metabolic process IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006694 steroid biosynthetic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0007030 Golgi organization IEP Neighborhood
MF GO:0008047 enzyme activator activity IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
BP GO:0008202 steroid metabolic process IEP Neighborhood
MF GO:0008536 Ran GTPase binding IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
MF GO:0015923 mannosidase activity IEP Neighborhood
MF GO:0016229 steroid dehydrogenase activity IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
BP GO:0019318 hexose metabolic process IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
MF GO:0030695 GTPase regulator activity IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
InterPro domains Description Start Stop
IPR007123 Gelsolin-like_dom 149 216
IPR007123 Gelsolin-like_dom 29 111
IPR007123 Gelsolin-like_dom 268 334
IPR007123 Gelsolin-like_dom 406 484
IPR007123 Gelsolin-like_dom 639 709
IPR007123 Gelsolin-like_dom 537 601
IPR003128 Villin_headpiece 944 979
No external refs found!