Gb_31595

Description : component IES2 of INO80 chromatin remodeling complex

Gene families : OG0003126 (Archaeplastida) Phylogenetic Tree(s): OG0003126_tree ,
OG_05_0002763 (LandPlants) Phylogenetic Tree(s): OG_05_0002763_tree ,
OG_06_0002459 (SeedPlants) Phylogenetic Tree(s): OG_06_0002459_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_31595
Cluster	HCCA: Cluster_193

Target	Alias	Description	ECC score	Gene Family Method	Actions
Zm00001e006133_P002	No alias	component IES2 of INO80 chromatin remodeling complex	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0031011	Ino80 complex	IEA	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0033202	DNA helicase complex	None	Extended
CC	GO:0044422	organelle part	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044427	chromosomal part	None	Extended
CC	GO:0044428	nuclear part	None	Extended
CC	GO:0044446	intracellular organelle part	None	Extended
CC	GO:0044454	nuclear chromosome part	None	Extended
CC	GO:0044464	cell part	None	Extended
CC	GO:0070603	SWI/SNF superfamily-type complex	None	Extended
CC	GO:0097346	INO80-type complex	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1904949	ATPase complex	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000375	RNA splicing, via transesterification reactions	IEP	Neighborhood
BP	GO:0000377	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	IEP	Neighborhood
BP	GO:0000398	mRNA splicing, via spliceosome	IEP	Neighborhood
BP	GO:0000726	non-recombinational repair	IEP	Neighborhood
CC	GO:0000775	chromosome, centromeric region	IEP	Neighborhood
MF	GO:0004674	protein serine/threonine kinase activity	IEP	Neighborhood
MF	GO:0004677	DNA-dependent protein kinase activity	IEP	Neighborhood
CC	GO:0005634	nucleus	IEP	Neighborhood
BP	GO:0006302	double-strand break repair	IEP	Neighborhood
BP	GO:0006303	double-strand break repair via nonhomologous end joining	IEP	Neighborhood
BP	GO:0007059	chromosome segregation	IEP	Neighborhood
BP	GO:0008380	RNA splicing	IEP	Neighborhood
BP	GO:0022402	cell cycle process	IEP	Neighborhood
CC	GO:0030532	small nuclear ribonucleoprotein complex	IEP	Neighborhood
CC	GO:0043226	organelle	IEP	Neighborhood
CC	GO:0043227	membrane-bounded organelle	IEP	Neighborhood
CC	GO:0043229	intracellular organelle	IEP	Neighborhood
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	Neighborhood
BP	GO:0045132	meiotic chromosome segregation	IEP	Neighborhood
CC	GO:0046540	U4/U6 x U5 tri-snRNP complex	IEP	Neighborhood
CC	GO:0097525	spliceosomal snRNP complex	IEP	Neighborhood
CC	GO:0097526	spliceosomal tri-snRNP complex	IEP	Neighborhood
CC	GO:0098687	chromosomal region	IEP	Neighborhood
BP	GO:0098813	nuclear chromosome segregation	IEP	Neighborhood
CC	GO:0120114	Sm-like protein family complex	IEP	Neighborhood
BP	GO:1903046	meiotic cell cycle process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR007529	Znf_HIT	856	886
IPR006880	INO80B_C	754	838

External Links

No external refs found!

Gb_31595

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation