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  5. Gb_31760

Gb_31760


Description : Pentatricopeptide repeat-containing protein At5g04810, chloroplastic OS=Arabidopsis thaliana (sp|q0wmy5|pp365_arath : 195.0)


Gene families : OG0006977 (Archaeplastida) Phylogenetic Tree(s): OG0006977_tree ,
OG_05_0005354 (LandPlants) Phylogenetic Tree(s): OG_05_0005354_tree ,
OG_06_0009081 (SeedPlants) Phylogenetic Tree(s): OG_06_0009081_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_31760
Cluster HCCA: Cluster_245

Target Alias Description ECC score Gene Family Method Actions
AT5G04810 No alias pentatricopeptide (PPR) repeat-containing protein 0.02 Archaeplastida
GSVIVT01034651001 No alias Pentatricopeptide repeat-containing protein At5g04810,... 0.04 Archaeplastida
LOC_Os04g58780.1 No alias Pentatricopeptide repeat-containing protein At5g04810,... 0.04 Archaeplastida
MA_10434757g0010 No alias Pentatricopeptide repeat-containing protein At5g04810,... 0.06 Archaeplastida
Pp3c16_280V3.1 No alias pentatricopeptide (PPR) repeat-containing protein 0.02 Archaeplastida
Solyc11g006680.3.1 No alias Pentatricopeptide repeat-containing protein At5g04810,... 0.07 Archaeplastida
Zm00001e041970_P002 No alias Pentatricopeptide repeat-containing protein At5g04810,... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003678 DNA helicase activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
BP GO:0006072 glycerol-3-phosphate metabolic process IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
BP GO:0046168 glycerol-3-phosphate catabolic process IEP Neighborhood
MF GO:0051287 NAD binding IEP Neighborhood
BP GO:0052646 alditol phosphate metabolic process IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
InterPro domains Description Start Stop
IPR000504 RRM_dom 183 255
No external refs found!