Coexpression cluster: Cluster_245 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0043039 tRNA aminoacylation 7.14% (5/70) 6.17 0.0 0.0
GO:0043038 amino acid activation 7.14% (5/70) 6.17 0.0 0.0
GO:0016875 ligase activity, forming carbon-oxygen bonds 7.14% (5/70) 6.2 0.0 0.0
GO:0004812 aminoacyl-tRNA ligase activity 7.14% (5/70) 6.2 0.0 0.0
GO:0006418 tRNA aminoacylation for protein translation 7.14% (5/70) 6.28 0.0 1e-06
GO:0097159 organic cyclic compound binding 32.86% (23/70) 1.8 0.0 1e-06
GO:1901363 heterocyclic compound binding 32.86% (23/70) 1.8 0.0 1e-06
GO:0016070 RNA metabolic process 11.43% (8/70) 3.91 0.0 1e-06
GO:0140101 catalytic activity, acting on a tRNA 7.14% (5/70) 5.55 0.0 2e-06
GO:0006399 tRNA metabolic process 7.14% (5/70) 5.5 0.0 2e-06
GO:0034660 ncRNA metabolic process 7.14% (5/70) 5.1 0.0 5e-06
GO:0003723 RNA binding 10.0% (7/70) 3.96 0.0 6e-06
GO:0016874 ligase activity 7.14% (5/70) 5.0 1e-06 7e-06
GO:0090304 nucleic acid metabolic process 12.86% (9/70) 3.08 1e-06 1.4e-05
GO:0046483 heterocycle metabolic process 14.29% (10/70) 2.76 2e-06 2.4e-05
GO:0006725 cellular aromatic compound metabolic process 14.29% (10/70) 2.73 3e-06 2.7e-05
GO:0035639 purine ribonucleoside triphosphate binding 18.57% (13/70) 2.23 3e-06 3.1e-05
GO:1901360 organic cyclic compound metabolic process 14.29% (10/70) 2.7 3e-06 3.1e-05
GO:0006520 cellular amino acid metabolic process 7.14% (5/70) 4.38 5e-06 4.1e-05
GO:0140098 catalytic activity, acting on RNA 8.57% (6/70) 3.72 7e-06 5.7e-05
GO:0006139 nucleobase-containing compound metabolic process 12.86% (9/70) 2.72 9e-06 6.7e-05
GO:0000166 nucleotide binding 20.0% (14/70) 1.99 9e-06 6.9e-05
GO:1901265 nucleoside phosphate binding 20.0% (14/70) 1.99 9e-06 6.9e-05
GO:0001882 nucleoside binding 7.14% (5/70) 4.0 1.6e-05 8e-05
GO:0032550 purine ribonucleoside binding 7.14% (5/70) 4.0 1.6e-05 8e-05
GO:0001883 purine nucleoside binding 7.14% (5/70) 4.0 1.6e-05 8e-05
GO:0005525 GTP binding 7.14% (5/70) 4.0 1.6e-05 8e-05
GO:0032561 guanyl ribonucleotide binding 7.14% (5/70) 4.0 1.6e-05 8e-05
GO:0032549 ribonucleoside binding 7.14% (5/70) 4.0 1.6e-05 8e-05
GO:0032553 ribonucleotide binding 18.57% (13/70) 2.01 1.7e-05 8.1e-05
GO:0019001 guanyl nucleotide binding 7.14% (5/70) 3.99 1.7e-05 8.2e-05
GO:0097367 carbohydrate derivative binding 18.57% (13/70) 2.0 1.8e-05 8.6e-05
GO:0034641 cellular nitrogen compound metabolic process 14.29% (10/70) 2.46 1.3e-05 9.4e-05
GO:0036094 small molecule binding 20.0% (14/70) 1.93 1.4e-05 9.5e-05
GO:0017076 purine nucleotide binding 18.57% (13/70) 2.02 1.6e-05 9.7e-05
GO:0003676 nucleic acid binding 15.71% (11/70) 2.27 1.6e-05 0.0001
GO:0032555 purine ribonucleotide binding 18.57% (13/70) 2.02 1.5e-05 0.000102
GO:0005488 binding 37.14% (26/70) 1.13 4.4e-05 0.000198
GO:0043168 anion binding 18.57% (13/70) 1.84 5.7e-05 0.000253
GO:0006082 organic acid metabolic process 7.14% (5/70) 3.31 0.000156 0.000638
GO:0043436 oxoacid metabolic process 7.14% (5/70) 3.31 0.000153 0.000644
GO:0019752 carboxylic acid metabolic process 7.14% (5/70) 3.31 0.000153 0.000644
GO:0044281 small molecule metabolic process 7.14% (5/70) 2.61 0.0014 0.005602
GO:0006438 valyl-tRNA aminoacylation 1.43% (1/70) 9.2 0.001695 0.006336
GO:0004655 porphobilinogen synthase activity 1.43% (1/70) 9.2 0.001695 0.006336
GO:0004832 valine-tRNA ligase activity 1.43% (1/70) 9.2 0.001695 0.006336
GO:0003674 molecular_function 44.29% (31/70) 0.68 0.002007 0.007344
GO:0005524 ATP binding 11.43% (8/70) 1.7 0.003142 0.011258
GO:0045454 cell redox homeostasis 1.43% (1/70) 8.2 0.003386 0.011886
GO:0005737 cytoplasm 2.86% (2/70) 4.42 0.003966 0.013645
GO:0008144 drug binding 11.43% (8/70) 1.62 0.004356 0.01469
GO:0044237 cellular metabolic process 17.14% (12/70) 1.23 0.00462 0.01528
GO:0006426 glycyl-tRNA aminoacylation 1.43% (1/70) 7.62 0.005075 0.016165
GO:0004820 glycine-tRNA ligase activity 1.43% (1/70) 7.62 0.005075 0.016165
GO:0052646 alditol phosphate metabolic process 1.43% (1/70) 7.2 0.006761 0.02005
GO:0006072 glycerol-3-phosphate metabolic process 1.43% (1/70) 7.2 0.006761 0.02005
GO:0046168 glycerol-3-phosphate catabolic process 1.43% (1/70) 7.2 0.006761 0.02005
GO:0006807 nitrogen compound metabolic process 15.71% (11/70) 1.23 0.006527 0.020411
GO:0009987 cellular process 18.57% (13/70) 1.07 0.007837 0.022846
GO:0030554 adenyl nucleotide binding 11.43% (8/70) 1.47 0.008224 0.02319
GO:0032559 adenyl ribonucleotide binding 11.43% (8/70) 1.47 0.008142 0.02334
GO:0043167 ion binding 20.0% (14/70) 1.0 0.008548 0.023715
GO:0043170 macromolecule metabolic process 14.29% (10/70) 1.23 0.009664 0.026385
GO:0004807 triose-phosphate isomerase activity 1.43% (1/70) 6.62 0.010125 0.027211
GO:0019725 cellular homeostasis 1.43% (1/70) 6.2 0.013477 0.035663
GO:0071704 organic substance metabolic process 17.14% (12/70) 0.98 0.016838 0.043882
GO:0016853 isomerase activity 2.86% (2/70) 3.32 0.017218 0.0442
GO:0006396 RNA processing 2.86% (2/70) 3.27 0.01833 0.046365
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_17 0.077 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_86 0.027 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_135 0.031 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_149 0.047 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_185 0.061 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_186 0.022 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_232 0.029 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_247 0.027 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_153 0.035 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_197 0.042 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_204 0.032 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_210 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_225 0.02 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_227 0.038 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_248 0.041 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_264 0.025 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_70 0.021 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_95 0.022 Archaeplastida Compare
Gingko biloba HCCA Cluster_175 0.023 Archaeplastida Compare
Zea mays HCCA Cluster_39 0.106 Archaeplastida Compare
Zea mays HCCA Cluster_180 0.026 Archaeplastida Compare
Zea mays HCCA Cluster_185 0.057 Archaeplastida Compare
Zea mays HCCA Cluster_199 0.044 Archaeplastida Compare
Zea mays HCCA Cluster_232 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_268 0.024 Archaeplastida Compare
Zea mays HCCA Cluster_318 0.026 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_41 0.035 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_65 0.079 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_114 0.036 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_20 0.102 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_260 0.021 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_290 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_65 0.021 Archaeplastida Compare
Picea abies HCCA Cluster_88 0.043 Archaeplastida Compare
Picea abies HCCA Cluster_269 0.068 Archaeplastida Compare
Picea abies HCCA Cluster_362 0.029 Archaeplastida Compare
Oryza sativa HCCA Cluster_90 0.058 Archaeplastida Compare
Oryza sativa HCCA Cluster_114 0.026 Archaeplastida Compare
Oryza sativa HCCA Cluster_188 0.036 Archaeplastida Compare
Oryza sativa HCCA Cluster_218 0.045 Archaeplastida Compare
Oryza sativa HCCA Cluster_243 0.025 Archaeplastida Compare
Oryza sativa HCCA Cluster_256 0.033 Archaeplastida Compare
Oryza sativa HCCA Cluster_324 0.038 Archaeplastida Compare
Oryza sativa HCCA Cluster_327 0.028 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_98 0.025 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_100 0.097 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_106 0.022 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_150 0.024 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_219 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_32 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_75 0.029 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_102 0.031 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_119 0.034 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_169 0.024 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_211 0.054 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_224 0.034 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_253 0.08 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_283 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_52 0.041 Archaeplastida Compare
Vitis vinifera HCCA Cluster_72 0.066 Archaeplastida Compare
Vitis vinifera HCCA Cluster_155 0.066 Archaeplastida Compare
Vitis vinifera HCCA Cluster_178 0.071 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_25 0.031 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_33 0.041 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_119 0.023 Archaeplastida Compare
Sequences (70) (download table)

InterPro Domains

GO Terms

Family Terms