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Description : component LSm7 of U6-associated LSm accessory ribonucleoprotein complex
Gene families : OG0001659 (Archaeplastida) Phylogenetic Tree(s): OG0001659_tree ,
OG_05_0006992 (LandPlants) Phylogenetic Tree(s): OG_05_0006992_tree ,
OG_06_0008530 (SeedPlants) Phylogenetic Tree(s): OG_06_0008530_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Gb_32195 | |
| Cluster | HCCA: Cluster_20 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cre03.g164101 | No alias | RNA processing.RNA splicing.U6-associated LSm accessory... | 0.02 | Archaeplastida | |
| Cre13.g566050 | No alias | RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm... | 0.03 | Archaeplastida | |
| LOC_Os07g41790.2 | No alias | component Sm-G of U1/U2/U4/U5-associated Sm accessory... | 0.03 | Archaeplastida | |
| Mp4g07410.1 | No alias | component Sm-G of U1/U2/U4/U5-associated Sm accessory... | 0.03 | Archaeplastida | |
| Pp3c8_4480V3.1 | No alias | Small nuclear ribonucleoprotein family protein | 0.02 | Archaeplastida | |
| Zm00001e006823_P001 | No alias | component LSm7 of U6-associated LSm accessory... | 0.02 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000814 | ESCRT II complex | IEP | Neighborhood |
| MF | GO:0004298 | threonine-type endopeptidase activity | IEP | Neighborhood |
| CC | GO:0005839 | proteasome core complex | IEP | Neighborhood |
| BP | GO:0006364 | rRNA processing | IEP | Neighborhood |
| BP | GO:0006888 | ER to Golgi vesicle-mediated transport | IEP | Neighborhood |
| BP | GO:0006914 | autophagy | IEP | Neighborhood |
| BP | GO:0016072 | rRNA metabolic process | IEP | Neighborhood |
| BP | GO:0016192 | vesicle-mediated transport | IEP | Neighborhood |
| CC | GO:0032991 | protein-containing complex | IEP | Neighborhood |
| CC | GO:0033177 | proton-transporting two-sector ATPase complex, proton-transporting domain | IEP | Neighborhood |
| BP | GO:0034470 | ncRNA processing | IEP | Neighborhood |
| BP | GO:0034613 | cellular protein localization | IEP | Neighborhood |
| CC | GO:0036452 | ESCRT complex | IEP | Neighborhood |
| BP | GO:0043248 | proteasome assembly | IEP | Neighborhood |
| CC | GO:0044433 | cytoplasmic vesicle part | IEP | Neighborhood |
| CC | GO:0044440 | endosomal part | IEP | Neighborhood |
| BP | GO:0045048 | protein insertion into ER membrane | IEP | Neighborhood |
| BP | GO:0048193 | Golgi vesicle transport | IEP | Neighborhood |
| BP | GO:0051179 | localization | IEP | Neighborhood |
| BP | GO:0051205 | protein insertion into membrane | IEP | Neighborhood |
| BP | GO:0051234 | establishment of localization | IEP | Neighborhood |
| BP | GO:0051641 | cellular localization | IEP | Neighborhood |
| BP | GO:0061919 | process utilizing autophagic mechanism | IEP | Neighborhood |
| MF | GO:0070003 | threonine-type peptidase activity | IEP | Neighborhood |
| BP | GO:0070727 | cellular macromolecule localization | IEP | Neighborhood |
| BP | GO:0071816 | tail-anchored membrane protein insertion into ER membrane | IEP | Neighborhood |
| BP | GO:0071985 | multivesicular body sorting pathway | IEP | Neighborhood |
| BP | GO:0072657 | protein localization to membrane | IEP | Neighborhood |
| BP | GO:0090150 | establishment of protein localization to membrane | IEP | Neighborhood |
| CC | GO:0098796 | membrane protein complex | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001163 | LSM_dom_euk/arc | 10 | 81 |
| No external refs found! |