Heatmap: Cluster_20 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log₂ transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene	Ovule	Ovule, mature	Ovule, pollinated	Strobilus, female	Ovulate strobilus	Microstrobilus	Kernel	Leaf	Leaf, female	Leaf, male	Leaf, salicylic acid	Leaf, seedling	Leaf, truncation control	Leaf, truncation treatment	Leaf, water	Yellow-green stripe leaves	Green leaves	Stem	Cambium	Root
Gb_01303	-0.08	0.81	1.04	0.16	0.7	0.27	0.21	-0.33	-0.92	-0.98	-0.83	-0.38	-1.11	-1.43	-0.73	-0.59	-0.43	0.58	0.5	0.3
Gb_01348	0.25	0.07	0.71	0.9	0.49	-0.1	-1.27	0.12	-0.69	-0.81	-0.19	-0.2	-1.19	-1.5	-0.29	-0.48	0.08	0.66	0.91	-0.64
Gb_01384	0.42	0.07	0.07	0.85	0.82	0.41	0.35	-0.02	-1.78	-1.35	0.72	-0.54	-0.75	-1.12	0.63	-1.84	-1.64	0.3	0.85	-2.6
Gb_01495	1.11	1.13	1.15	0.83	0.38	-1.29	-0.03	-0.43	-0.51	-0.92	-1.11	-1.1	-1.27	-1.66	-1.35	-0.19	-0.29	0.41	0.55	-1.19
Gb_03928	0.69	0.32	1.32	1.03	0.49	-0.69	-1.31	-0.37	-0.92	-0.88	-0.69	-1.27	-0.37	-0.82	-0.62	-0.55	-0.67	0.73	0.41	-0.01
Gb_04416	0.52	0.8	1.02	-0.27	0.63	0.71	-0.3	-0.47	-1.12	-1.26	-1.24	-0.85	-0.49	-0.1	-1.14	-0.89	-0.49	0.53	0.67	0.01
Gb_04586	0.52	0.94	1.46	1.19	0.49	-0.75	0.21	-0.63	-1.04	-1.05	-0.75	-0.73	-1.88	-2.13	-0.44	-1.21	-1.54	0.22	0.65	-0.14
Gb_04742	0.39	0.47	0.66	0.72	0.48	-0.58	-0.59	-0.22	-0.33	-0.39	-0.19	-0.64	-0.93	-0.96	-0.12	-0.05	-0.16	0.41	0.33	0.04
Gb_05051	0.66	0.82	1.1	-0.19	0.75	1.27	-0.4	-0.46	-1.02	-1.13	-1.69	-1.19	-1.38	-1.6	-1.49	-0.36	-0.34	0.88	-0.15	-0.01
Gb_05631	0.65	0.47	0.6	1.09	0.39	-0.11	-0.69	-0.25	-0.44	-0.73	-0.51	-0.49	-1.43	-1.81	-0.51	-0.22	0.05	0.42	0.0	0.43
Gb_06605	-0.05	0.85	0.84	0.02	0.95	0.18	-0.25	-0.1	-0.83	-0.79	-0.41	-0.47	-1.28	-1.57	-0.25	-1.2	-0.7	0.53	0.72	0.32
Gb_06607	0.12	0.4	0.45	0.67	0.83	-0.08	-0.19	-0.19	-0.89	-0.67	-0.06	-0.38	-1.22	-1.04	0.01	-1.43	-0.82	0.39	0.92	0.24
Gb_06984	0.58	0.34	1.32	0.84	1.07	0.35	-0.92	-0.46	-1.71	-2.02	-1.01	0.02	-0.97	-0.82	-0.98	-1.49	-0.4	0.88	0.07	-0.57
Gb_07361	-0.58	0.38	0.47	-0.3	0.42	0.01	-0.32	-0.0	-0.29	-0.15	-0.75	0.18	-0.47	-0.07	-0.72	-0.08	-0.13	0.88	0.28	0.07
Gb_07901	0.25	1.14	1.53	0.58	0.47	0.4	-0.61	-0.32	-1.07	-1.09	-0.79	-0.12	-3.55	-3.28	-0.97	-0.79	0.04	0.36	0.22	-0.22
Gb_08028	0.46	-0.23	0.81	1.06	0.44	0.43	0.1	-0.44	-1.22	-1.16	-0.64	-0.49	-1.24	-1.1	-0.82	-0.99	-0.37	0.57	0.92	0.12
Gb_08080	0.27	0.07	0.49	0.63	0.72	0.39	0.25	-0.27	-1.03	-0.97	-0.62	-0.44	-0.63	-0.61	-0.59	-1.36	-0.95	0.95	0.63	0.09
Gb_08114	1.05	0.89	1.33	0.23	0.69	0.17	-0.56	-0.22	-1.29	-1.25	-1.75	-0.31	-2.71	-2.86	-1.75	-0.76	-0.33	0.81	0.34	0.27
Gb_08210	0.53	-0.21	1.28	0.87	0.39	-0.16	-0.48	0.08	-0.57	-0.48	-0.18	-0.18	-1.55	-1.83	-0.27	-0.6	-0.2	0.16	0.64	-0.61
Gb_09048	0.93	0.51	0.95	0.49	0.52	0.13	-2.0	-0.45	-0.51	-0.67	-0.42	-0.89	-0.89	-1.41	-0.32	-0.33	0.22	0.61	-0.1	0.09
Gb_09359	0.67	0.55	0.77	0.32	0.98	-0.2	0.16	-0.21	-0.98	-0.98	-0.76	-1.2	-0.74	-0.91	-0.81	-1.66	-1.45	1.07	0.56	0.21
Gb_09474	0.43	0.73	1.24	0.42	0.36	0.5	-0.38	-0.19	-0.98	-0.92	-0.48	-0.31	-0.98	-1.3	-0.58	-1.11	-0.25	0.24	0.44	-0.05
Gb_09834	0.09	0.74	1.2	0.14	0.53	-0.19	0.03	-0.4	-0.25	-0.35	-0.77	-0.47	-2.0	-2.51	-0.74	-0.33	-0.21	0.51	0.78	0.0
Gb_11570	-0.12	0.29	0.52	0.34	0.55	-0.25	-0.46	-0.11	-0.58	-0.53	-0.17	0.08	-0.46	-0.43	-0.25	-1.02	0.05	0.22	0.76	0.26
Gb_11612	0.79	1.12	1.64	-0.34	0.24	-1.53	-0.46	-0.48	-0.38	-0.5	-0.19	-0.65	-1.2	-1.58	-0.25	-0.61	-0.66	0.0	0.58	-0.24
Gb_12103	0.7	-0.12	0.38	0.82	0.55	0.04	0.15	-0.01	-0.64	-0.74	0.06	-0.56	-0.19	-0.46	0.07	-0.81	-0.8	0.17	0.12	-0.28
Gb_12247	0.49	0.45	0.83	0.57	0.48	0.27	0.22	-0.49	-0.8	-0.78	-0.98	-0.73	-0.89	-0.97	-1.01	-0.86	-0.63	0.56	1.12	-0.26
Gb_13169	0.5	0.81	0.97	-0.0	0.41	-0.82	0.49	-0.38	-0.14	-0.06	-0.18	-0.93	-1.54	-1.55	-0.16	-0.18	-0.1	0.23	0.36	-0.55
Gb_13217	1.28	0.89	0.81	0.57	0.25	-0.48	0.2	-0.31	-0.64	-0.79	-0.44	-0.7	-0.91	-1.17	-0.3	-0.35	-1.06	-0.24	0.52	-0.49
Gb_13296	0.64	0.24	0.55	-0.02	0.35	0.56	0.17	-0.06	-1.14	-0.94	-0.73	-0.26	-0.54	-0.75	-0.66	-1.14	-0.65	0.64	0.75	0.41
Gb_14061	0.08	0.38	0.61	0.97	0.29	-0.45	-0.26	-0.35	-0.71	-0.4	0.05	-0.38	-0.99	-1.19	0.21	-0.72	-0.59	0.39	0.83	-0.06
Gb_14376	1.72	2.14	2.37	-0.0	-0.04	-4.26	-0.8	-2.49	-3.89	-3.72	-3.56	-3.54	-3.41	-3.75	-3.53	-3.59	-3.52	-1.53	1.36	-0.55
Gb_14413	-0.05	0.26	0.54	-0.41	0.44	0.52	0.13	-0.16	-0.21	-0.2	-0.57	-0.25	-1.38	-1.45	-0.2	-0.32	-0.01	0.39	0.7	0.33
Gb_14650	0.07	0.57	0.85	0.48	0.42	-0.21	-0.6	-0.22	-0.6	-0.5	0.06	-0.64	-1.14	-1.3	-0.0	-0.61	-0.52	0.45	1.0	-0.12
Gb_14838	0.29	0.88	1.27	0.76	0.51	-0.12	-1.04	-0.35	-1.23	-1.18	-0.5	-1.05	-0.83	-0.48	-0.46	-0.78	-0.98	0.65	0.67	-0.16
Gb_14992	0.78	0.1	0.39	0.6	0.19	0.13	0.28	-0.09	-0.77	-0.92	-0.2	-1.04	-0.46	-0.64	-0.15	-0.68	-0.58	0.61	0.32	0.23
Gb_15034	0.82	0.96	0.88	0.36	1.1	0.79	0.16	-0.22	-1.49	-1.56	-1.82	-1.12	-2.17	-2.17	-1.71	-1.43	-1.27	1.1	0.75	-0.96
Gb_15189	0.17	0.06	0.86	-0.37	0.25	-1.36	0.09	-0.56	-0.11	0.01	0.26	-1.26	-1.05	-1.28	0.24	-0.08	-0.34	0.23	1.01	0.47
Gb_15913	0.73	0.76	0.69	0.24	0.56	0.99	0.49	-0.64	-0.69	-0.44	-1.09	-0.83	-4.57	-3.82	-1.19	-0.26	-0.29	0.55	0.44	-0.09
Gb_16514	0.34	0.91	0.76	0.56	0.66	-0.8	-0.31	-0.13	-0.61	-0.56	-0.8	-0.51	-1.18	-1.11	-0.79	-0.76	-0.28	0.79	0.65	0.02
Gb_16544	0.54	0.48	1.01	0.95	0.84	0.46	0.34	-0.41	-1.35	-1.25	-1.11	-0.62	-1.82	-1.97	-0.92	-0.89	-0.64	0.68	0.67	-0.61
Gb_17178	0.49	0.13	0.31	0.39	0.52	0.25	-0.06	-0.0	-0.68	-0.65	-0.02	-0.72	-0.24	-0.53	-0.03	-1.1	-1.1	0.49	0.69	0.07
Gb_18208	0.81	1.34	1.66	0.12	0.84	0.77	-1.06	-0.39	-1.38	-1.33	-2.01	-1.05	-5.92	-5.14	-1.88	-0.91	-0.33	0.83	-0.36	0.02
Gb_18873	0.21	0.28	0.81	0.7	0.6	0.2	-0.55	-0.26	-0.63	-0.63	-0.94	-0.36	-0.58	-0.7	-0.94	-0.15	0.2	0.51	0.2	0.05
Gb_19317	0.65	0.09	0.38	-0.6	0.46	0.18	0.12	-0.42	-0.41	-0.87	-0.3	-0.07	-0.9	-0.76	-0.13	0.03	-0.41	0.7	0.34	0.38
Gb_19524	-0.78	0.24	-0.2	-0.84	1.08	-2.28	0.31	-0.21	-0.53	-0.32	-0.61	-0.16	-1.96	-2.05	-0.53	-0.51	-0.17	0.84	1.76	0.45
Gb_20647	0.54	0.83	1.02	0.65	0.55	0.03	-0.47	-0.25	-0.82	-0.88	-0.16	-0.62	-1.62	-1.55	-0.23	-0.27	-0.78	0.49	0.5	-0.48
Gb_20783	0.14	0.03	0.86	0.53	0.3	-1.88	-0.77	-0.37	-0.59	-0.36	-0.83	-0.62	-0.72	-0.95	-0.39	0.16	-0.28	1.06	0.75	0.59
Gb_21405	0.68	0.59	0.99	0.67	0.46	-0.05	-0.94	-0.08	-0.34	-0.49	-0.45	-0.69	-2.29	-2.15	-0.32	-0.12	-0.26	0.57	0.4	-0.21
Gb_21489	0.06	0.39	0.45	0.4	0.26	-0.12	-0.66	-0.09	-0.33	-0.39	-0.11	-0.31	-0.23	-0.35	-0.06	-0.59	-0.37	0.31	0.46	0.42
Gb_21685	-0.35	0.6	0.44	0.07	0.35	-0.09	0.27	-0.49	-0.52	-0.38	-0.11	-0.66	-1.05	-0.98	-0.09	-0.51	0.01	0.49	0.8	0.43
Gb_21697	0.49	0.29	1.05	0.69	0.6	0.5	-0.9	-0.19	-0.63	-0.79	-0.98	-0.32	-0.9	-0.93	-0.95	-0.58	-0.23	0.53	0.34	0.01
Gb_22157	0.43	-0.25	0.36	0.56	0.44	1.01	-0.31	-0.08	-0.77	-0.81	-0.54	-0.11	-0.67	-0.6	-0.62	-0.76	0.05	0.62	0.0	0.07
Gb_22479	-0.18	0.03	-0.24	-0.51	0.66	0.6	0.69	-0.06	-0.8	-0.61	-2.04	-0.26	-1.13	-1.33	-1.69	-0.54	-0.09	1.42	0.85	0.38
Gb_23933	0.13	0.51	0.22	-0.66	0.64	-1.16	0.45	-0.74	-0.32	-0.34	-0.04	-0.54	-1.8	-1.75	0.11	0.12	0.05	0.49	1.11	0.13
Gb_23962	0.01	0.15	0.02	0.23	0.34	-0.06	0.37	-0.25	-0.2	-0.28	-0.48	-0.6	-0.37	-0.34	-0.21	-0.12	-0.66	0.72	0.52	0.25
Gb_24569	-0.7	-0.14	0.31	-0.24	0.39	-0.56	0.02	-0.38	-0.06	0.06	-0.51	0.25	-1.38	-1.7	-0.68	0.01	0.64	0.63	1.03	0.34
Gb_25569	0.24	0.58	0.91	0.62	0.74	0.24	-0.07	-0.36	-1.1	-1.08	-0.64	-0.46	-0.41	-0.41	-0.48	-1.04	-0.64	0.62	0.13	0.04
Gb_25575	0.44	1.02	0.58	0.0	0.36	-1.46	0.3	-0.63	-0.4	-0.33	0.04	-0.89	-0.3	-0.24	0.28	-0.56	-1.26	0.06	0.21	0.37
Gb_26150	0.35	0.79	0.46	0.14	0.31	-0.49	0.07	-0.62	-0.24	-0.3	-0.4	-0.65	-0.97	-0.84	-0.45	-0.09	-0.3	0.63	0.58	0.27
Gb_26464	0.77	0.36	0.56	0.99	0.62	-0.01	-2.27	-0.14	-0.47	-0.58	-0.46	-0.48	-0.97	-0.95	-0.45	-0.25	-0.33	0.66	0.18	-0.06
Gb_28910	0.04	-0.09	0.94	0.95	0.3	-0.87	0.18	-0.12	-1.12	-1.03	-0.27	-0.78	-1.05	-0.91	-0.23	-0.35	-0.14	0.81	0.94	-0.39
Gb_29260	0.71	1.27	0.8	0.48	0.78	-1.18	-1.07	-0.42	-1.27	-1.14	-0.95	-1.49	-1.86	-1.5	-0.76	-0.27	-0.61	0.95	0.64	0.57
Gb_29817	-0.12	0.35	0.9	0.34	0.22	-1.38	-0.1	-0.31	-0.14	-0.13	-0.85	-0.95	-1.55	-1.59	-0.93	0.33	0.03	0.92	1.08	0.01
Gb_30012	-0.09	0.55	0.51	-0.38	0.27	-0.73	0.4	-0.5	-0.37	-0.4	-0.08	-0.67	-0.24	-0.45	-0.0	-0.37	-0.24	0.16	0.79	0.5
Gb_30105	-0.64	-0.15	-0.35	0.23	0.06	0.19	-0.41	-0.39	-0.04	-0.32	-0.2	-0.09	-0.5	0.19	-0.2	-0.08	0.03	0.67	0.8	0.26
Gb_30890	0.53	0.01	0.73	0.18	0.74	0.25	-0.37	0.02	-0.66	-0.75	-0.08	-0.18	-1.44	-1.4	-0.11	-1.04	-0.71	0.73	0.62	0.15
Gb_32195	0.68	0.59	1.08	0.52	0.86	0.75	-0.3	-0.43	-1.1	-1.37	-1.03	-0.55	-3.76	-3.82	-0.76	-1.03	-0.44	0.8	0.65	-0.03
Gb_32348	0.26	0.32	0.6	0.34	0.41	-0.47	-0.14	-0.1	-0.44	-0.47	-0.07	-0.34	-0.64	-0.95	-0.05	-0.74	-0.17	0.26	0.79	0.2
Gb_32531	0.69	0.73	0.89	0.59	1.1	-0.52	-1.61	-0.3	-0.71	-0.9	-0.47	-0.78	-0.78	-0.55	-0.51	-0.23	-0.73	0.67	0.37	-0.69
Gb_34330	0.93	0.34	0.73	0.59	0.39	-0.2	-1.14	-0.24	-0.31	-0.47	0.08	-0.91	-1.18	-1.28	0.17	-0.3	-0.46	0.48	-0.0	0.2
Gb_34973	0.08	0.53	0.59	-0.18	0.65	0.05	0.32	-0.07	-0.36	-0.54	-0.45	-0.24	-0.99	-1.37	-0.32	-0.2	-0.2	0.63	0.34	0.02
Gb_35444	0.35	0.5	1.09	0.14	0.38	0.52	0.01	-0.22	-0.63	-0.61	-0.33	-0.42	-1.01	-0.99	-0.4	-0.47	-0.64	0.26	0.38	0.02
Gb_35471	0.42	0.53	0.51	0.24	0.45	-0.53	-1.56	-0.11	-0.61	-0.89	-0.25	-0.2	-1.29	-0.56	-0.16	-0.76	-1.16	0.94	1.12	0.34
Gb_35765	0.65	-0.22	0.99	1.0	0.68	0.33	-0.36	-0.17	-1.23	-1.25	-0.55	-0.41	-1.03	-0.98	-0.85	-1.19	-0.67	0.99	0.34	-0.14
Gb_36095	0.62	0.79	0.83	0.34	0.33	-0.34	0.56	-0.23	-0.86	-0.71	-0.51	-0.75	-1.01	-1.22	-0.41	-1.19	-0.88	0.5	0.75	0.13
Gb_37117	0.75	-0.15	0.63	0.53	0.63	-0.1	-0.66	0.07	-0.6	-0.69	-0.26	-0.37	-1.05	-1.0	-0.5	-0.43	0.4	0.52	0.46	-0.3
Gb_37226	0.66	0.41	1.13	0.6	0.24	-0.23	-0.49	-0.17	-0.54	-0.59	-0.26	-0.53	-1.78	-1.69	-0.41	-0.28	-0.42	0.29	1.09	-0.73
Gb_38788	-0.06	0.13	0.44	0.55	0.45	-0.35	-0.26	-0.32	-0.28	-0.28	-0.24	-0.61	-0.87	-0.96	-0.06	-0.19	-0.13	0.73	0.56	0.31
Gb_39051	0.61	-0.06	0.75	0.7	0.52	0.06	-0.12	-0.14	-0.66	-0.71	-0.22	-0.18	-1.38	-1.48	-0.38	-0.84	-0.46	0.59	0.72	-0.06
Gb_40256	0.19	0.12	0.92	0.09	0.3	0.3	0.06	-0.29	-0.34	-0.51	-0.7	-0.21	-0.21	-0.18	-0.6	-0.3	-0.09	0.15	0.64	-0.57
Gb_40802	0.63	0.22	1.21	0.39	0.4	0.6	-0.29	-0.01	-1.17	-1.1	-0.78	-0.32	-0.88	-1.03	-0.59	-1.15	-0.35	0.56	0.52	-0.16
Gb_41048	0.51	-0.25	0.08	-0.56	1.15	-2.22	-1.23	-0.29	-1.17	-1.17	0.42	-0.67	-2.5	-2.49	0.64	0.33	0.13	0.95	1.07	0.24
Gb_41049	0.63	0.61	0.75	0.62	0.62	-1.32	-1.22	-0.38	-1.25	-1.08	0.13	-0.94	-2.16	-2.57	0.31	-0.12	-0.54	0.75	0.93	0.32
Gb_41192	0.65	0.07	0.89	0.16	0.51	0.53	-0.48	-0.16	-0.85	-0.75	-0.31	-0.31	-0.09	-0.34	-0.55	-1.03	-0.5	0.57	0.05	0.05
Gb_41770	0.72	-0.49	0.25	0.31	0.34	0.34	0.28	0.09	-0.63	-0.65	-0.1	-0.65	-0.83	-0.92	-0.1	-0.57	-0.13	0.55	0.42	0.18

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.