AT2G45110 (ATHEXP BETA 1.1,...)

Aliases : ATHEXP BETA 1.1, EXPB4, ATEXPB4

Description : expansin B4

Gene families : OG0000383 (Archaeplastida) Phylogenetic Tree(s): OG0000383_tree ,
OG_05_0000369 (LandPlants) Phylogenetic Tree(s): OG_05_0000369_tree ,
OG_06_0000947 (SeedPlants) Phylogenetic Tree(s): OG_06_0000947_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G45110
Cluster	HCCA: Cluster_71

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00009p00266410	evm_27.TU.AmTr_v1...	Cell wall.cell wall proteins.expansins.beta-type expansin	0.03	Archaeplastida
LOC_Os02g42650.1	No alias	beta-class expansin	0.02	Archaeplastida
LOC_Os04g46650.1	No alias	Expansin-B5 OS=Oryza sativa subsp. japonica...	0.03	Archaeplastida
MA_166764g0010	No alias	Expansin-B17 OS=Oryza sativa subsp. japonica...	0.02	Archaeplastida
MA_78155g0010	No alias	Expansin-B17 OS=Oryza sativa subsp. japonica...	0.02	Archaeplastida
MA_9323664g0010	No alias	Expansin-B3 OS=Arabidopsis thaliana...	0.02	Archaeplastida
Pp3c17_12980V3.1	No alias	expansin B3	0.02	Archaeplastida
Pp3c1_37980V3.1	No alias	expansin B3	0.03	Archaeplastida
Solyc10g008440.3.1	No alias	beta-class expansin	0.03	Archaeplastida
Zm00001e000036_P001	No alias	Expansin-B4 OS=Oryza sativa subsp. japonica...	0.03	Archaeplastida
Zm00001e037884_P001	No alias	Expansin-B6 OS=Oryza sativa subsp. japonica...	0.03	Archaeplastida
Zm00001e037885_P001	No alias	Expansin-B6 OS=Oryza sativa subsp. japonica...	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0000902	cell morphogenesis	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	ISM	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009664	plant-type cell wall organization	None	Extended
BP	GO:0009826	unidimensional cell growth	ISS	Interproscan
BP	GO:0009826	unidimensional cell growth	NAS	Interproscan
BP	GO:0009827	plant-type cell wall modification	None	Extended
BP	GO:0009828	plant-type cell wall loosening	ISS	Interproscan
BP	GO:0009828	plant-type cell wall loosening	NAS	Interproscan
BP	GO:0009831	plant-type cell wall modification involved in multidimensional cell growth	ISS	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016049	cell growth	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0032989	cellular component morphogenesis	None	Extended
BP	GO:0040007	growth	None	Extended
BP	GO:0042545	cell wall modification	None	Extended
BP	GO:0042547	cell wall modification involved in multidimensional cell growth	None	Extended
BP	GO:0045229	external encapsulating structure organization	None	Extended
BP	GO:0048589	developmental growth	None	Extended
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0060560	developmental growth involved in morphogenesis	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	None	Extended
BP	GO:0071669	plant-type cell wall organization or biogenesis	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004126	cytidine deaminase activity	IEP	Neighborhood
MF	GO:0004857	enzyme inhibitor activity	IEP	Neighborhood
MF	GO:0005199	structural constituent of cell wall	IEP	Neighborhood
MF	GO:0008474	palmitoyl-(protein) hydrolase activity	IEP	Neighborhood
BP	GO:0008655	pyrimidine-containing compound salvage	IEP	Neighborhood
CC	GO:0009705	plant-type vacuole membrane	IEP	Neighborhood
BP	GO:0009964	negative regulation of flavonoid biosynthetic process	IEP	Neighborhood
BP	GO:0010023	proanthocyanidin biosynthetic process	IEP	Neighborhood
BP	GO:0010231	maintenance of seed dormancy	IEP	Neighborhood
MF	GO:0019239	deaminase activity	IEP	Neighborhood
MF	GO:0030234	enzyme regulator activity	IEP	Neighborhood
MF	GO:0033729	anthocyanidin reductase activity	IEP	Neighborhood
MF	GO:0046910	pectinesterase inhibitor activity	IEP	Neighborhood
BP	GO:0097437	maintenance of dormancy	IEP	Neighborhood
MF	GO:0098599	palmitoyl hydrolase activity	IEP	Neighborhood
MF	GO:0098772	molecular function regulator	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR007117	Expansin_CBD	163	244
IPR009009	RlpA-like_DPBB	70	151

External Links

No external refs found!

AT2G45110 (ATHEXP BETA 1.1,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation