AT2G45420 (LBD18)

Aliases : LBD18

Description : LOB domain-containing protein 18

Gene families : OG0000938 (Archaeplastida) Phylogenetic Tree(s): OG0000938_tree ,
OG_05_0000559 (LandPlants) Phylogenetic Tree(s): OG_05_0000559_tree ,
OG_06_0000336 (SeedPlants) Phylogenetic Tree(s): OG_06_0000336_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G45420
Cluster	HCCA: Cluster_15

Target	Alias	Description	ECC score	Gene Family Method
Gb_02663	No alias	transcription factor (AS2/LOB)	0.03	Archaeplastida
LOC_Os02g57490.1	No alias	transcription factor (AS2/LOB)	0.04	Archaeplastida
MA_126761g0010	No alias	transcription factor (AS2/LOB)	0.04	Archaeplastida
MA_8060019g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_962403g0010	No alias	transcription factor (AS2/LOB)	0.03	Archaeplastida
Pp3c7_9340V3.1	No alias	LOB domain-containing protein 20	0.02	Archaeplastida
Zm00001e000390_P001	No alias	transcription factor (AS2/LOB)	0.04	Archaeplastida
Zm00001e000391_P001	No alias	transcription factor (AS2/LOB)	0.03	Archaeplastida
Zm00001e001031_P001	No alias	transcription factor (AS2/LOB)	0.04	Archaeplastida
Zm00001e019686_P001	No alias	transcription factor (AS2/LOB)	0.03	Archaeplastida
Zm00001e038582_P001	No alias	transcription factor (AS2/LOB)	0.02	Archaeplastida
Zm00001e042347_P001	No alias	transcription factor (AS2/LOB)	0.03	Archaeplastida
Zm00001e042443_P001	No alias	transcription factor (AS2/LOB)	0.03	Archaeplastida
Zm00001e042444_P001	No alias	transcription factor (AS2/LOB)	0.04	Archaeplastida
Zm00001e042448_P001	No alias	transcription factor (AS2/LOB)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0000902	cell morphogenesis	None	Extended
BP	GO:0000904	cell morphogenesis involved in differentiation	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IDA	Interproscan
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0007015	actin filament organization	None	Extended
BP	GO:0007155	cell adhesion	RCA	Interproscan
BP	GO:0008064	regulation of actin polymerization or depolymerization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009791	post-embryonic development	None	Extended
BP	GO:0009888	tissue development	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010053	root epidermal cell differentiation	None	Extended
BP	GO:0010087	phloem or xylem histogenesis	None	Extended
BP	GO:0010089	xylem development	IMP	Interproscan
BP	GO:0010089	xylem development	RCA	Interproscan
BP	GO:0010090	trichome morphogenesis	RCA	Interproscan
BP	GO:0010311	lateral root formation	IMP	Interproscan
BP	GO:0010638	positive regulation of organelle organization	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0021700	developmental maturation	None	Extended
BP	GO:0022610	biological adhesion	None	Extended
BP	GO:0030154	cell differentiation	None	Extended
BP	GO:0030832	regulation of actin filament length	None	Extended
BP	GO:0030833	regulation of actin filament polymerization	None	Extended
BP	GO:0030838	positive regulation of actin filament polymerization	None	Extended
BP	GO:0031334	positive regulation of protein complex assembly	None	Extended
BP	GO:0032271	regulation of protein polymerization	None	Extended
BP	GO:0032273	positive regulation of protein polymerization	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0032535	regulation of cellular component size	None	Extended
BP	GO:0032956	regulation of actin cytoskeleton organization	None	Extended
BP	GO:0032970	regulation of actin filament-based process	None	Extended
BP	GO:0032989	cellular component morphogenesis	None	Extended
BP	GO:0033043	regulation of organelle organization	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043254	regulation of protein complex assembly	None	Extended
BP	GO:0044036	cell wall macromolecule metabolic process	RCA	Interproscan
BP	GO:0044087	regulation of cellular component biogenesis	None	Extended
BP	GO:0044089	positive regulation of cellular component biogenesis	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0045010	actin nucleation	RCA	Interproscan
BP	GO:0045229	external encapsulating structure organization	None	Extended
BP	GO:0048469	cell maturation	None	Extended
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	None	Extended
BP	GO:0048646	anatomical structure formation involved in morphogenesis	None	Extended
BP	GO:0048764	trichoblast maturation	None	Extended
BP	GO:0048765	root hair cell differentiation	RCA	Interproscan
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051128	regulation of cellular component organization	None	Extended
BP	GO:0051130	positive regulation of cellular component organization	None	Extended
BP	GO:0051493	regulation of cytoskeleton organization	None	Extended
BP	GO:0051495	positive regulation of cytoskeleton organization	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	RCA	Interproscan
BP	GO:0071695	anatomical structure maturation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0090066	regulation of anatomical structure size	None	Extended
BP	GO:0090627	plant epidermal cell differentiation	None	Extended
BP	GO:0097435	supramolecular fiber organization	None	Extended
BP	GO:0110053	regulation of actin filament organization	None	Extended
BP	GO:1902903	regulation of supramolecular fiber organization	None	Extended
BP	GO:1902905	positive regulation of supramolecular fiber organization	None	Extended
BP	GO:1905393	plant organ formation	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Neighborhood
MF	GO:0004721	phosphoprotein phosphatase activity	IEP	Neighborhood
MF	GO:0004722	protein serine/threonine phosphatase activity	IEP	Neighborhood
MF	GO:0005488	binding	IEP	Neighborhood
MF	GO:0005507	copper ion binding	IEP	Neighborhood
MF	GO:0005543	phospholipid binding	IEP	Neighborhood
CC	GO:0005667	transcription factor complex	IEP	Neighborhood
BP	GO:0006355	regulation of transcription, DNA-templated	IEP	Neighborhood
BP	GO:0006869	lipid transport	IEP	Neighborhood
BP	GO:0007275	multicellular organism development	IEP	Neighborhood
MF	GO:0008115	sarcosine oxidase activity	IEP	Neighborhood
MF	GO:0008289	lipid binding	IEP	Neighborhood
MF	GO:0008429	phosphatidylethanolamine binding	IEP	Neighborhood
BP	GO:0009785	blue light signaling pathway	IEP	Neighborhood
BP	GO:0009790	embryo development	IEP	Neighborhood
BP	GO:0009793	embryo development ending in seed dormancy	IEP	Neighborhood
BP	GO:0009889	regulation of biosynthetic process	IEP	Neighborhood
BP	GO:0009891	positive regulation of biosynthetic process	IEP	Neighborhood
BP	GO:0009893	positive regulation of metabolic process	IEP	Neighborhood
BP	GO:0009933	meristem structural organization	IEP	Neighborhood
BP	GO:0010022	meristem determinacy	IEP	Neighborhood
BP	GO:0010030	positive regulation of seed germination	IEP	Neighborhood
BP	GO:0010080	regulation of floral meristem growth	IEP	Neighborhood
BP	GO:0010081	regulation of inflorescence meristem growth	IEP	Neighborhood
BP	GO:0010262	somatic embryogenesis	IEP	Neighborhood
BP	GO:0010468	regulation of gene expression	IEP	Neighborhood
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:0010582	floral meristem determinacy	IEP	Neighborhood
BP	GO:0010604	positive regulation of macromolecule metabolic process	IEP	Neighborhood
BP	GO:0010628	positive regulation of gene expression	IEP	Neighborhood
CC	GO:0016602	CCAAT-binding factor complex	IEP	Neighborhood
MF	GO:0016645	oxidoreductase activity, acting on the CH-NH group of donors	IEP	Neighborhood
MF	GO:0016647	oxidoreductase activity, acting on the CH-NH group of donors, oxygen as acceptor	IEP	Neighborhood
MF	GO:0016757	transferase activity, transferring glycosyl groups	IEP	Neighborhood
MF	GO:0016791	phosphatase activity	IEP	Neighborhood
BP	GO:0018345	protein palmitoylation	IEP	Neighborhood
BP	GO:0019217	regulation of fatty acid metabolic process	IEP	Neighborhood
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	Neighborhood
BP	GO:0030522	intracellular receptor signaling pathway	IEP	Neighborhood
CC	GO:0031224	intrinsic component of membrane	IEP	Neighborhood
CC	GO:0031225	anchored component of membrane	IEP	Neighborhood
BP	GO:0031325	positive regulation of cellular metabolic process	IEP	Neighborhood
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	Neighborhood
BP	GO:0031328	positive regulation of cellular biosynthetic process	IEP	Neighborhood
BP	GO:0042304	regulation of fatty acid biosynthetic process	IEP	Neighborhood
CC	GO:0044798	nuclear transcription factor complex	IEP	Neighborhood
BP	GO:0045723	positive regulation of fatty acid biosynthetic process	IEP	Neighborhood
BP	GO:0045834	positive regulation of lipid metabolic process	IEP	Neighborhood
BP	GO:0045893	positive regulation of transcription, DNA-templated	IEP	Neighborhood
BP	GO:0045923	positive regulation of fatty acid metabolic process	IEP	Neighborhood
BP	GO:0045935	positive regulation of nucleobase-containing compound metabolic process	IEP	Neighborhood
BP	GO:0046685	response to arsenic-containing substance	IEP	Neighborhood
BP	GO:0046889	positive regulation of lipid biosynthetic process	IEP	Neighborhood
BP	GO:0046890	regulation of lipid biosynthetic process	IEP	Neighborhood
BP	GO:0048532	anatomical structure arrangement	IEP	Neighborhood
BP	GO:0048580	regulation of post-embryonic development	IEP	Neighborhood
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	IEP	Neighborhood
BP	GO:0051239	regulation of multicellular organismal process	IEP	Neighborhood
BP	GO:0051252	regulation of RNA metabolic process	IEP	Neighborhood
BP	GO:0051254	positive regulation of RNA metabolic process	IEP	Neighborhood
BP	GO:0062013	positive regulation of small molecule metabolic process	IEP	Neighborhood
BP	GO:0071483	cellular response to blue light	IEP	Neighborhood
MF	GO:0080043	quercetin 3-O-glucosyltransferase activity	IEP	Neighborhood
MF	GO:0080044	quercetin 7-O-glucosyltransferase activity	IEP	Neighborhood
CC	GO:0090575	RNA polymerase II transcription factor complex	IEP	Neighborhood
MF	GO:0140110	transcription regulator activity	IEP	Neighborhood
BP	GO:1902680	positive regulation of RNA biosynthetic process	IEP	Neighborhood
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	Neighborhood
BP	GO:1903508	positive regulation of nucleic acid-templated transcription	IEP	Neighborhood
BP	GO:2000026	regulation of multicellular organismal development	IEP	Neighborhood
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR004883	LOB	37	135

External Links

No external refs found!

AT2G45420 (LBD18)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation