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  5. Gb_32806

Gb_32806


Description : transcription factor (DREB)


Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0021046 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_32806
Cluster HCCA: Cluster_174

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00268460 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AMTR_s00010p00098700 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
AMTR_s00069p00141520 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AMTR_s00115p00032780 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
AT1G19210 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT5G11590 TINY2 Integrase-type DNA-binding superfamily protein 0.04 Archaeplastida
Cre08.g364400 No alias No description available 0.02 Archaeplastida
GSVIVT01013905001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
GSVIVT01013914001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01013916001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01013923001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01013929001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01030515001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
Gb_34848 No alias transcription factor (ERF) 0.05 Archaeplastida
LOC_Os01g07120.1 No alias transcription factor (DREB) 0.02 Archaeplastida
LOC_Os02g34260.1 No alias transcription factor (ERF) 0.02 Archaeplastida
LOC_Os02g34270.1 No alias Ethylene-responsive transcription factor ERF114... 0.02 Archaeplastida
LOC_Os09g39850.1 No alias transcription factor (ERF) 0.02 Archaeplastida
MA_15000g0010 No alias Ethylene-responsive transcription factor ERF017... 0.02 Archaeplastida
MA_198113g0010 No alias Ethylene-responsive transcription factor 1A... 0.05 Archaeplastida
MA_33394g0020 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_426919g0020 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_426919g0030 No alias transcription factor (DREB) 0.04 Archaeplastida
MA_45733g0020 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_5306433g0010 No alias Ethylene-responsive transcription factor ERF017... 0.03 Archaeplastida
MA_88g0020 No alias transcription factor (DREB) 0.04 Archaeplastida
MA_928517g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c10_17870V3.1 No alias Integrase-type DNA-binding superfamily protein 0.01 Archaeplastida
Pp3c16_13260V3.1 No alias Integrase-type DNA-binding superfamily protein 0.01 Archaeplastida
Pp3c16_13280V3.1 No alias Integrase-type DNA-binding superfamily protein 0.01 Archaeplastida
Pp3c19_6370V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c1_27440V3.1 No alias Integrase-type DNA-binding superfamily protein 0.07 Archaeplastida
Pp3c22_1800V3.1 No alias Integrase-type DNA-binding superfamily protein 0.01 Archaeplastida
Pp3c25_1760V3.1 No alias related to AP2 11 0.01 Archaeplastida
Pp3c27_1350V3.1 No alias ERF domain protein 12 0.04 Archaeplastida
Pp3c27_6030V3.1 No alias Integrase-type DNA-binding superfamily protein 0.01 Archaeplastida
Pp3c4_2530V3.1 No alias Integrase-type DNA-binding superfamily protein 0.01 Archaeplastida
Solyc03g095973.1.1 No alias transcription factor (DREB) 0.03 Archaeplastida
Solyc03g117130.3.1 No alias transcription factor (ERF) 0.02 Archaeplastida
Solyc04g078640.3.1 No alias transcription factor (DREB) 0.03 Archaeplastida
Solyc05g051200.1.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e004208_P001 No alias transcription factor (DREB) 0.03 Archaeplastida
Zm00001e008306_P001 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e016064_P001 No alias transcription factor (ERF) 0.04 Archaeplastida
Zm00001e026911_P005 No alias transcription factor (DREB) 0.05 Archaeplastida
Zm00001e030090_P001 No alias transcription factor (DREB) 0.02 Archaeplastida
Zm00001e033537_P001 No alias transcription factor (ERF) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 84 134
No external refs found!