Description : Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana (sp|q94hw2|polr1_arath : 160.0)
Gene families : OG0000390 (Archaeplastida) Phylogenetic Tree(s): OG0000390_tree ,
OG_05_0000129 (LandPlants) Phylogenetic Tree(s): OG_05_0000129_tree ,
OG_06_0000040 (SeedPlants) Phylogenetic Tree(s): OG_06_0000040_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Gb_32814 | |
Cluster | HCCA: Cluster_42 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Gb_03950 | No alias | Retrovirus-related Pol polyprotein from transposon RE1... | 0.04 | Archaeplastida | |
Gb_04117 | No alias | Retrovirus-related Pol polyprotein from transposon RE1... | 0.09 | Archaeplastida | |
Gb_07759 | No alias | Retrovirus-related Pol polyprotein from transposon RE2... | 0.06 | Archaeplastida | |
Gb_08526 | No alias | Retrovirus-related Pol polyprotein from transposon RE1... | 0.1 | Archaeplastida | |
Gb_10404 | No alias | Retrovirus-related Pol polyprotein from transposon RE1... | 0.06 | Archaeplastida | |
Gb_11892 | No alias | no hits & (original description: none) | 0.11 | Archaeplastida | |
Gb_13743 | No alias | Retrovirus-related Pol polyprotein from transposon RE1... | 0.05 | Archaeplastida | |
Gb_15410 | No alias | Retrovirus-related Pol polyprotein from transposon RE1... | 0.17 | Archaeplastida | |
Gb_16945 | No alias | Retrovirus-related Pol polyprotein from transposon RE1... | 0.05 | Archaeplastida | |
Gb_18114 | No alias | Retrovirus-related Pol polyprotein from transposon RE1... | 0.1 | Archaeplastida | |
Gb_18380 | No alias | Retrovirus-related Pol polyprotein from transposon RE1... | 0.04 | Archaeplastida | |
Gb_21087 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida | |
Gb_25019 | No alias | Retrovirus-related Pol polyprotein from transposon RE2... | 0.04 | Archaeplastida | |
Gb_26000 | No alias | Retrovirus-related Pol polyprotein from transposon RE1... | 0.04 | Archaeplastida | |
Gb_26646 | No alias | Retrovirus-related Pol polyprotein from transposon RE1... | 0.04 | Archaeplastida | |
Gb_30022 | No alias | Retrovirus-related Pol polyprotein from transposon RE2... | 0.08 | Archaeplastida | |
Gb_33085 | No alias | Retrovirus-related Pol polyprotein from transposon RE1... | 0.04 | Archaeplastida | |
Gb_33568 | No alias | Retrovirus-related Pol polyprotein from transposon RE2... | 0.06 | Archaeplastida | |
Gb_35456 | No alias | Retrovirus-related Pol polyprotein from transposon RE1... | 0.04 | Archaeplastida | |
Gb_36638 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.07 | Archaeplastida | |
Gb_39693 | No alias | Retrovirus-related Pol polyprotein from transposon RE1... | 0.05 | Archaeplastida | |
Gb_41260 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.04 | Archaeplastida | |
Gb_41307 | No alias | no hits & (original description: none) | 0.1 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Neighborhood |
BP | GO:0006259 | DNA metabolic process | IEP | Neighborhood |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Neighborhood |
BP | GO:0015074 | DNA integration | IEP | Neighborhood |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Neighborhood |
BP | GO:0046483 | heterocycle metabolic process | IEP | Neighborhood |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Neighborhood |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR013103 | RVT_2 | 1 | 146 |
No external refs found! |