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  5. Gb_32855

Gb_32855


Description : no hits & (original description: none)


Gene families : OG0002876 (Archaeplastida) Phylogenetic Tree(s): OG0002876_tree ,
OG_05_0002743 (LandPlants) Phylogenetic Tree(s): OG_05_0002743_tree ,
OG_06_0002914 (SeedPlants) Phylogenetic Tree(s): OG_06_0002914_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_32855
Cluster HCCA: Cluster_315

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00147p00090390 evm_27.TU.AmTr_v1... Protein degradation.26S proteasome.20S core... 0.03 Archaeplastida
AT5G35590 PAA1 proteasome alpha subunit A1 0.07 Archaeplastida
Cpa|evm.model.tig00001160.15 No alias Protein degradation.26S proteasome.20S core... 0.03 Archaeplastida
Cre17.g705400 No alias Protein degradation.26S proteasome.20S core... 0.06 Archaeplastida
GSVIVT01016731001 No alias Protein degradation.26S proteasome.20S core... 0.03 Archaeplastida
LOC_Os03g08280.1 No alias component alpha type-1 of 26S proteasome 0.04 Archaeplastida
Mp3g08330.1 No alias component alpha type-1 of 26S proteasome 0.05 Archaeplastida
Pp3c24_20680V3.1 No alias proteasome alpha subunit A1 0.04 Archaeplastida
Zm00001e000584_P001 No alias component alpha type-1 of 26S proteasome 0.09 Archaeplastida
Zm00001e038868_P001 No alias component alpha type-1 of 26S proteasome 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004298 threonine-type endopeptidase activity IEA Interproscan
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0002161 aminoacyl-tRNA editing activity IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0003746 translation elongation factor activity IEP Neighborhood
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006414 translational elongation IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:0006605 protein targeting IEP Neighborhood
BP GO:0006612 protein targeting to membrane IEP Neighborhood
BP GO:0006613 cotranslational protein targeting to membrane IEP Neighborhood
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
MF GO:0008312 7S RNA binding IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
CC GO:0030684 preribosome IEP Neighborhood
CC GO:0032040 small-subunit processome IEP Neighborhood
BP GO:0033365 protein localization to organelle IEP Neighborhood
BP GO:0034613 cellular protein localization IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
BP GO:0045047 protein targeting to ER IEP Neighborhood
MF GO:0045735 nutrient reservoir activity IEP Neighborhood
CC GO:0048500 signal recognition particle IEP Neighborhood
BP GO:0070727 cellular macromolecule localization IEP Neighborhood
BP GO:0070972 protein localization to endoplasmic reticulum IEP Neighborhood
BP GO:0072594 establishment of protein localization to organelle IEP Neighborhood
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Neighborhood
BP GO:0072657 protein localization to membrane IEP Neighborhood
BP GO:0090150 establishment of protein localization to membrane IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood
BP GO:1901575 organic substance catabolic process IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 1 37
No external refs found!