Coexpression cluster: Cluster_315 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0070003 threonine-type peptidase activity 4.35% (3/69) 6.64 4e-06 0.000243
GO:0005839 proteasome core complex 4.35% (3/69) 6.64 4e-06 0.000243
GO:0004298 threonine-type endopeptidase activity 4.35% (3/69) 6.64 4e-06 0.000243
GO:0051603 proteolysis involved in cellular protein catabolic process 4.35% (3/69) 5.08 9.8e-05 0.004015
GO:0019773 proteasome core complex, alpha-subunit complex 2.9% (2/69) 7.06 9.8e-05 0.00501
GO:0034660 ncRNA metabolic process 4.35% (3/69) 4.38 0.000413 0.014052
GO:0043632 modification-dependent macromolecule catabolic process 2.9% (2/69) 4.77 0.002486 0.024149
GO:0019941 modification-dependent protein catabolic process 2.9% (2/69) 4.77 0.002486 0.024149
GO:0006511 ubiquitin-dependent protein catabolic process 2.9% (2/69) 4.77 0.002486 0.024149
GO:0043038 amino acid activation 2.9% (2/69) 4.87 0.002162 0.025941
GO:0043039 tRNA aminoacylation 2.9% (2/69) 4.87 0.002162 0.025941
GO:0030490 maturation of SSU-rRNA 1.45% (1/69) 8.23 0.003338 0.02619
GO:0006777 Mo-molybdopterin cofactor biosynthetic process 1.45% (1/69) 8.23 0.003338 0.02619
GO:0030515 snoRNA binding 1.45% (1/69) 8.23 0.003338 0.02619
GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) 1.45% (1/69) 8.23 0.003338 0.02619
GO:0019720 Mo-molybdopterin cofactor metabolic process 1.45% (1/69) 8.23 0.003338 0.02619
GO:0140101 catalytic activity, acting on a tRNA 2.9% (2/69) 4.25 0.005028 0.026302
GO:0006399 tRNA metabolic process 2.9% (2/69) 4.2 0.005344 0.026589
GO:0000139 Golgi membrane 1.45% (1/69) 7.64 0.005003 0.026857
GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity 1.45% (1/69) 7.64 0.005003 0.026857
GO:0005338 nucleotide-sugar transmembrane transporter activity 1.45% (1/69) 7.64 0.005003 0.026857
GO:0016755 transferase activity, transferring amino-acyl groups 1.45% (1/69) 7.64 0.005003 0.026857
GO:0015780 nucleotide-sugar transmembrane transport 1.45% (1/69) 7.64 0.005003 0.026857
GO:0051189 prosthetic group metabolic process 1.45% (1/69) 7.64 0.005003 0.026857
GO:0090481 pyrimidine nucleotide-sugar transmembrane transport 1.45% (1/69) 7.64 0.005003 0.026857
GO:0043545 molybdopterin cofactor metabolic process 1.45% (1/69) 7.64 0.005003 0.026857
GO:0044464 cell part 8.7% (6/69) 1.91 0.005288 0.026969
GO:0008233 peptidase activity 5.8% (4/69) 3.16 0.001061 0.027051
GO:0044265 cellular macromolecule catabolic process 2.9% (2/69) 4.5 0.003586 0.027096
GO:0018193 peptidyl-amino acid modification 2.9% (2/69) 4.44 0.003856 0.027128
GO:0070011 peptidase activity, acting on L-amino acid peptides 5.8% (4/69) 3.21 0.000935 0.027237
GO:0044424 intracellular part 8.7% (6/69) 2.01 0.003768 0.027451
GO:0044248 cellular catabolic process 4.35% (3/69) 3.5 0.002434 0.027583
GO:0016875 ligase activity, forming carbon-oxygen bonds 2.9% (2/69) 4.9 0.002059 0.027996
GO:0004812 aminoacyl-tRNA ligase activity 2.9% (2/69) 4.9 0.002059 0.027996
GO:0018199 peptidyl-glutamine modification 1.45% (1/69) 9.23 0.00167 0.028396
GO:0016603 glutaminyl-peptide cyclotransferase activity 1.45% (1/69) 9.23 0.00167 0.028396
GO:0017186 peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase 1.45% (1/69) 9.23 0.00167 0.028396
GO:0006418 tRNA aminoacylation for protein translation 2.9% (2/69) 4.98 0.001859 0.029177
GO:0009056 catabolic process 4.35% (3/69) 3.2 0.004379 0.029777
GO:0004175 endopeptidase activity 4.35% (3/69) 3.73 0.001528 0.034625
GO:0016192 vesicle-mediated transport 2.9% (2/69) 3.92 0.007797 0.037873
GO:0051640 organelle localization 1.45% (1/69) 6.64 0.009981 0.039156
GO:0006914 autophagy 1.45% (1/69) 6.64 0.009981 0.039156
GO:0061919 process utilizing autophagic mechanism 1.45% (1/69) 6.64 0.009981 0.039156
GO:0140056 organelle localization by membrane tethering 1.45% (1/69) 6.64 0.009981 0.039156
GO:0140029 exocytic process 1.45% (1/69) 6.64 0.009981 0.039156
GO:0006904 vesicle docking involved in exocytosis 1.45% (1/69) 6.64 0.009981 0.039156
GO:0022406 membrane docking 1.45% (1/69) 6.64 0.009981 0.039156
GO:0048278 vesicle docking 1.45% (1/69) 6.64 0.009981 0.039156
GO:0000049 tRNA binding 1.45% (1/69) 6.64 0.009981 0.039156
GO:0016874 ligase activity 2.9% (2/69) 3.7 0.010448 0.039468
GO:0030145 manganese ion binding 1.45% (1/69) 6.9 0.008324 0.039492
GO:0140098 catalytic activity, acting on RNA 4.35% (3/69) 2.74 0.010428 0.040139
GO:0006508 proteolysis 4.35% (3/69) 2.71 0.010958 0.040645
GO:0009057 macromolecule catabolic process 2.9% (2/69) 3.58 0.012249 0.044622
GO:1901264 carbohydrate derivative transport 1.45% (1/69) 6.23 0.013286 0.04755
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_200 0.037 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_226 0.03 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_234 0.02 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_267 0.025 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_73 0.04 Archaeplastida Compare
Zea mays HCCA Cluster_7 0.026 Archaeplastida Compare
Zea mays HCCA Cluster_56 0.021 Archaeplastida Compare
Zea mays HCCA Cluster_250 0.022 Archaeplastida Compare
Zea mays HCCA Cluster_261 0.031 Archaeplastida Compare
Zea mays HCCA Cluster_348 0.025 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_20 0.026 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_117 0.023 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_139 0.023 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_158 0.024 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_22 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_385 0.026 Archaeplastida Compare
Picea abies HCCA Cluster_403 0.023 Archaeplastida Compare
Picea abies HCCA Cluster_501 0.022 Archaeplastida Compare
Oryza sativa HCCA Cluster_164 0.035 Archaeplastida Compare
Oryza sativa HCCA Cluster_316 0.025 Archaeplastida Compare
Oryza sativa HCCA Cluster_347 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_353 0.025 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_3 0.025 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_12 0.019 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_163 0.026 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_79 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_105 0.025 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_250 0.03 Archaeplastida Compare
Vitis vinifera HCCA Cluster_1 0.028 Archaeplastida Compare
Vitis vinifera HCCA Cluster_39 0.023 Archaeplastida Compare
Vitis vinifera HCCA Cluster_167 0.023 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_50 0.064 Archaeplastida Compare
Sequences (69) (download table)

InterPro Domains

GO Terms

Family Terms