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  5. Gb_33230

Gb_33230


Description : inner nuclear envelope component Cter-SUN of SUN-WIP cytoskeleton-nucleoskeleton-linker complex


Gene families : OG0001769 (Archaeplastida) Phylogenetic Tree(s): OG0001769_tree ,
OG_05_0001562 (LandPlants) Phylogenetic Tree(s): OG_05_0001562_tree ,
OG_06_0001476 (SeedPlants) Phylogenetic Tree(s): OG_06_0001476_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_33230
Cluster HCCA: Cluster_209

Target Alias Description ECC score Gene Family Method Actions
AT3G10730 ATSUN2, SUN2 SAD1/UNC-84 domain protein 2 0.03 Archaeplastida
Pp3c7_4170V3.1 No alias SAD1/UNC-84 domain protein 1 0.03 Archaeplastida
Smo138182 No alias Cytoskeleton.cytoskeleton-nucleoskeleton linking.SUN-WIP... 0.02 Archaeplastida
Smo64465 No alias Cytoskeleton.cytoskeleton-nucleoskeleton linking.SUN-WIP... 0.03 Archaeplastida
Zm00001e017295_P001 No alias inner nuclear envelope component Cter-SUN of SUN-WIP... 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
BP GO:0008037 cell recognition IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Neighborhood
MF GO:0019104 DNA N-glycosylase activity IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0048544 recognition of pollen IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR012919 SUN_dom 331 463
No external refs found!