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  5. AT2G46530

AT2G46530 (ARF11)


Aliases : ARF11

Description : auxin response factor 11


Gene families : OG0000080 (Archaeplastida) Phylogenetic Tree(s): OG0000080_tree ,
OG_05_0000395 (LandPlants) Phylogenetic Tree(s): OG_05_0000395_tree ,
OG_06_0003855 (SeedPlants) Phylogenetic Tree(s): OG_06_0003855_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G46530
Cluster HCCA: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00168950 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.B3... 0.03 Archaeplastida
AT4G23980 ARF9 auxin response factor 9 0.04 Archaeplastida
Gb_33804 No alias transcription factor (ARF) 0.04 Archaeplastida
LOC_Os02g41800.1 No alias transcription factor (ARF) 0.03 Archaeplastida
MA_10432580g0010 No alias transcription factor (ARF) 0.03 Archaeplastida
Pp3c13_4720V3.1 No alias auxin response factor 6 0.03 Archaeplastida
Solyc10g086130.3.1 No alias transcription factor (ARF) 0.05 Archaeplastida
Zm00001e003229_P002 No alias transcription factor (ARF) 0.02 Archaeplastida
Zm00001e006577_P003 No alias transcription factor (ARF) 0.03 Archaeplastida
Zm00001e020205_P004 No alias transcription factor (ARF) 0.05 Archaeplastida
Zm00001e041910_P003 No alias transcription factor (ARF) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
CC GO:0009506 plasmodesma IDA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000255 allantoin metabolic process IEP Neighborhood
BP GO:0000256 allantoin catabolic process IEP Neighborhood
BP GO:0002252 immune effector process IEP Neighborhood
MF GO:0003724 RNA helicase activity IEP Neighborhood
MF GO:0003727 single-stranded RNA binding IEP Neighborhood
MF GO:0004402 histone acetyltransferase activity IEP Neighborhood
MF GO:0004564 beta-fructofuranosidase activity IEP Neighborhood
MF GO:0004848 ureidoglycolate hydrolase activity IEP Neighborhood
CC GO:0005677 chromatin silencing complex IEP Neighborhood
CC GO:0005887 integral component of plasma membrane IEP Neighborhood
BP GO:0006144 purine nucleobase metabolic process IEP Neighborhood
BP GO:0006145 purine nucleobase catabolic process IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006304 DNA modification IEP Neighborhood
BP GO:0006305 DNA alkylation IEP Neighborhood
BP GO:0006306 DNA methylation IEP Neighborhood
BP GO:0006349 regulation of gene expression by genetic imprinting IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006473 protein acetylation IEP Neighborhood
MF GO:0008080 N-acetyltransferase activity IEP Neighborhood
MF GO:0008515 sucrose transmembrane transporter activity IEP Neighborhood
BP GO:0008643 carbohydrate transport IEP Neighborhood
BP GO:0009112 nucleobase metabolic process IEP Neighborhood
BP GO:0009615 response to virus IEP Neighborhood
BP GO:0009616 virus induced gene silencing IEP Neighborhood
BP GO:0009686 gibberellin biosynthetic process IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0009960 endosperm development IEP Neighborhood
BP GO:0010135 ureide metabolic process IEP Neighborhood
BP GO:0010136 ureide catabolic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
MF GO:0015154 disaccharide transmembrane transporter activity IEP Neighborhood
MF GO:0015157 oligosaccharide transmembrane transporter activity IEP Neighborhood
BP GO:0015766 disaccharide transport IEP Neighborhood
BP GO:0015770 sucrose transport IEP Neighborhood
BP GO:0015772 oligosaccharide transport IEP Neighborhood
BP GO:0016458 gene silencing IEP Neighborhood
MF GO:0016813 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines IEP Neighborhood
CC GO:0017053 transcriptional repressor complex IEP Neighborhood
BP GO:0030422 production of siRNA involved in RNA interference IEP Neighborhood
BP GO:0031047 gene silencing by RNA IEP Neighborhood
BP GO:0031050 dsRNA fragmentation IEP Neighborhood
BP GO:0032259 methylation IEP Neighborhood
MF GO:0034212 peptide N-acetyltransferase activity IEP Neighborhood
BP GO:0035690 cellular response to drug IEP Neighborhood
BP GO:0035821 modification of morphology or physiology of other organism IEP Neighborhood
BP GO:0040029 regulation of gene expression, epigenetic IEP Neighborhood
BP GO:0043414 macromolecule methylation IEP Neighborhood
BP GO:0043605 cellular amide catabolic process IEP Neighborhood
BP GO:0044003 modification by symbiont of host morphology or physiology IEP Neighborhood
BP GO:0044419 interspecies interaction between organisms IEP Neighborhood
BP GO:0044728 DNA methylation or demethylation IEP Neighborhood
BP GO:0045596 negative regulation of cell differentiation IEP Neighborhood
BP GO:0046113 nucleobase catabolic process IEP Neighborhood
BP GO:0048235 pollen sperm cell differentiation IEP Neighborhood
BP GO:0048497 maintenance of floral organ identity IEP Neighborhood
BP GO:0048519 negative regulation of biological process IEP Neighborhood
MF GO:0051119 sugar transmembrane transporter activity IEP Neighborhood
BP GO:0051607 defense response to virus IEP Neighborhood
BP GO:0051701 interaction with host IEP Neighborhood
BP GO:0051817 modification of morphology or physiology of other organism involved in symbiotic interaction IEP Neighborhood
BP GO:0052018 modulation by symbiont of RNA levels in host IEP Neighborhood
BP GO:0052249 modulation of RNA levels in other organism involved in symbiotic interaction IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Neighborhood
BP GO:0070918 production of small RNA involved in gene silencing by RNA IEP Neighborhood
BP GO:0071215 cellular response to abscisic acid stimulus IEP Neighborhood
BP GO:0071236 cellular response to antibiotic IEP Neighborhood
BP GO:0071396 cellular response to lipid IEP Neighborhood
BP GO:0071407 cellular response to organic cyclic compound IEP Neighborhood
BP GO:0071446 cellular response to salicylic acid stimulus IEP Neighborhood
BP GO:0071470 cellular response to osmotic stress IEP Neighborhood
BP GO:0071514 genetic imprinting IEP Neighborhood
BP GO:0072523 purine-containing compound catabolic process IEP Neighborhood
BP GO:0080188 RNA-directed DNA methylation IEP Neighborhood
CC GO:0090568 nuclear transcriptional repressor complex IEP Neighborhood
BP GO:0090700 maintenance of plant organ identity IEP Neighborhood
BP GO:0097306 cellular response to alcohol IEP Neighborhood
BP GO:0098586 cellular response to virus IEP Neighborhood
InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 124 224
IPR033389 AUX/IAA_dom 475 573
IPR010525 Auxin_resp 250 329
No external refs found!