Gb_33867

Description : Probable E3 ubiquitin ligase SUD1 OS=Arabidopsis thaliana (sp|f4jkk0|sud1_arath : 107.0)

Gene families : OG0000436 (Archaeplastida) Phylogenetic Tree(s): OG0000436_tree ,
OG_05_0022080 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0021476 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_33867
Cluster	HCCA: Cluster_222

Target	Alias	Description	ECC score	Gene Family Method	Actions
Solyc08g014080.4.1	No alias	RING-v-class E3 ligase	0.03	Archaeplastida
Zm00001e014915_P002	No alias	RING-v-class E3 ligase	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0009055	electron transfer activity	IEP	Neighborhood
MF	GO:0051536	iron-sulfur cluster binding	IEP	Neighborhood
MF	GO:0051540	metal cluster binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR011016	Znf_RING-CH	34	78

External Links

No external refs found!

Gb_33867

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation