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  5. Gb_33900

Gb_33900


Description : associated component RACK1 of SSU proteome


Gene families : OG0002844 (Archaeplastida) Phylogenetic Tree(s): OG0002844_tree ,
OG_05_0002983 (LandPlants) Phylogenetic Tree(s): OG_05_0002983_tree ,
OG_06_0003274 (SeedPlants) Phylogenetic Tree(s): OG_06_0003274_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_33900
Cluster HCCA: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00105p00058690 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.06 Archaeplastida
AT1G18080 ATARCA, RACK1A, RACK1A_AT Transducin/WD40 repeat-like superfamily protein 0.03 Archaeplastida
AT1G48630 RACK1B_AT receptor for activated C kinase 1B 0.05 Archaeplastida
AT3G18130 RACK1C_AT receptor for activated C kinase 1C 0.04 Archaeplastida
Cpa|evm.model.tig00000169.6 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 Archaeplastida
Cre06.g278222 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 Archaeplastida
GSVIVT01008395001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 Archaeplastida
LOC_Os01g49290.1 No alias associated component RACK1 of SSU proteome 0.04 Archaeplastida
LOC_Os05g47890.1 No alias associated component RACK1 of SSU proteome 0.04 Archaeplastida
MA_10435947g0010 No alias Guanine nucleotide-binding protein subunit beta-like... 0.03 Archaeplastida
Mp3g15630.1 No alias associated component RACK1 of SSU proteome 0.04 Archaeplastida
Pp3c16_13180V3.1 No alias receptor for activated C kinase 1B 0.07 Archaeplastida
Pp3c27_6040V3.1 No alias receptor for activated C kinase 1B 0.03 Archaeplastida
Pp3c5_770V3.1 No alias receptor for activated C kinase 1B 0.05 Archaeplastida
Smo266532 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 Archaeplastida
Solyc03g119040.3.1 No alias associated component RACK1 of SSU proteome 0.03 Archaeplastida
Solyc06g069010.3.1 No alias associated component RACK1 of SSU proteome 0.04 Archaeplastida
Zm00001e026456_P001 No alias associated component RACK1 of SSU proteome 0.05 Archaeplastida
Zm00001e032340_P001 No alias associated component RACK1 of SSU proteome 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Neighborhood
BP GO:0000097 sulfur amino acid biosynthetic process IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP Neighborhood
MF GO:0004834 tryptophan synthase activity IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
BP GO:0006555 methionine metabolic process IEP Neighborhood
BP GO:0006568 tryptophan metabolic process IEP Neighborhood
BP GO:0006576 cellular biogenic amine metabolic process IEP Neighborhood
BP GO:0006586 indolalkylamine metabolic process IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
MF GO:0008172 S-methyltransferase activity IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0009066 aspartate family amino acid metabolic process IEP Neighborhood
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Neighborhood
BP GO:0009072 aromatic amino acid family metabolic process IEP Neighborhood
BP GO:0009086 methionine biosynthetic process IEP Neighborhood
BP GO:0009308 amine metabolic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
MF GO:0016836 hydro-lyase activity IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0034728 nucleosome organization IEP Neighborhood
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP Neighborhood
BP GO:0042430 indole-containing compound metabolic process IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0044106 cellular amine metabolic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
BP GO:0044272 sulfur compound biosynthetic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
MF GO:0051287 NAD binding IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
MF GO:0070403 NAD+ binding IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
BP GO:1901605 alpha-amino acid metabolic process IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001680 WD40_repeat 236 262
IPR001680 WD40_repeat 147 180
IPR001680 WD40_repeat 98 133
IPR001680 WD40_repeat 187 222
IPR001680 WD40_repeat 55 91
IPR001680 WD40_repeat 288 311
IPR001680 WD40_repeat 9 43
No external refs found!