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  5. Gb_34238

Gb_34238


Description : AAA-ATPase At5g57480 OS=Arabidopsis thaliana (sp|q9fkm3|aatpk_arath : 374.0)


Gene families : OG0000095 (Archaeplastida) Phylogenetic Tree(s): OG0000095_tree ,
OG_05_0000059 (LandPlants) Phylogenetic Tree(s): OG_05_0000059_tree ,
OG_06_0001286 (SeedPlants) Phylogenetic Tree(s): OG_06_0001286_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_34238
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00014p00241930 evm_27.TU.AmTr_v1... Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis thaliana 0.04 Archaeplastida
AMTR_s00019p00244830 evm_27.TU.AmTr_v1... AAA-ATPase At3g50940 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00036p00176790 evm_27.TU.AmTr_v1... Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis thaliana 0.03 Archaeplastida
AT2G18193 No alias P-loop containing nucleoside triphosphate hydrolases... 0.04 Archaeplastida
AT3G28510 No alias P-loop containing nucleoside triphosphate hydrolases... 0.04 Archaeplastida
AT3G28540 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 Archaeplastida
AT3G28600 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 Archaeplastida
AT3G50930 BCS1 cytochrome BC1 synthesis 0.05 Archaeplastida
AT5G40000 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 Archaeplastida
GSVIVT01023336001 No alias AAA-ATPase At3g28600 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01027397001 No alias AAA-ATPase At2g46620 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01029545001 No alias AAA-ATPase At3g50940 OS=Arabidopsis thaliana 0.06 Archaeplastida
Gb_27546 No alias AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana... 0.04 Archaeplastida
Gb_34239 No alias AAA-ATPase At4g25835 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os01g42030.1 No alias Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os03g02330.1 No alias AAA-ATPase At2g46620 OS=Arabidopsis thaliana... 0.07 Archaeplastida
LOC_Os03g38800.1 No alias AAA-ATPase At5g17740 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os03g58800.1 No alias AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os06g48250.1 No alias AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os07g09470.1 No alias AAA-ATPase At3g28610 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os09g27340.1 No alias AAA-ATPase At5g57480 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os10g37500.1 No alias AAA-ATPase At2g46620 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os12g28590.1 No alias AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os12g44190.1 No alias AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os12g44220.1 No alias AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_10067279g0010 No alias AAA-ATPase At5g57480 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_10430798g0020 No alias AAA-ATPase At3g28510 OS=Arabidopsis thaliana... 0.05 Archaeplastida
MA_10435468g0020 No alias AAA-ATPase At3g28510 OS=Arabidopsis thaliana... 0.09 Archaeplastida
MA_10436428g0010 No alias AAA-ATPase At3g28610 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_161279g0020 No alias AAA-ATPase At3g28610 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_354684g0010 No alias AAA-ATPase At3g28510 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_56516g0010 No alias AAA-ATPase At3g28570, mitochondrial OS=Arabidopsis... 0.02 Archaeplastida
Pp3c12_21960V3.1 No alias P-loop containing nucleoside triphosphate hydrolases... 0.07 Archaeplastida
Pp3c21_200V3.1 No alias P-loop containing nucleoside triphosphate hydrolases... 0.05 Archaeplastida
Pp3c8_710V3.1 No alias P-loop containing nucleoside triphosphate hydrolases... 0.07 Archaeplastida
Solyc02g084900.2.1 No alias AAA-ATPase At2g18193 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc02g087540.3.1 No alias AAA-ATPase At3g28510 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc10g007280.4.1 No alias Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis... 0.03 Archaeplastida
Solyc12g055810.1.1 No alias AAA-ATPase At5g57480 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e000097_P001 No alias AAA-ATPase At2g46620 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e003357_P001 No alias AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e003358_P001 No alias AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e004348_P001 No alias AAA-ATPase At2g46620 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e008810_P001 No alias AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e012527_P001 No alias AAA-ATPase At2g46620 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e013138_P001 No alias AAA-ATPase At5g57480 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e020637_P001 No alias Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e033043_P001 No alias AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e038158_P001 No alias AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0015936 coenzyme A metabolic process IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
MF GO:0071949 FAD binding IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 246 382
IPR025753 AAA_N_dom 34 130
No external refs found!