AT2G46990 (IAA20)

Aliases : IAA20

Description : indole-3-acetic acid inducible 20

Gene families : OG0000129 (Archaeplastida) Phylogenetic Tree(s): OG0000129_tree ,
OG_05_0000051 (LandPlants) Phylogenetic Tree(s): OG_05_0000051_tree ,
OG_06_0010191 (SeedPlants) Phylogenetic Tree(s): OG_06_0010191_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G46990
Cluster	HCCA: Cluster_176

Target	Alias	Description	ECC score	Gene Family Method
AT3G15540	MSG2, IAA19	indole-3-acetic acid inducible 19	0.03	Archaeplastida
GSVIVT01015350001	No alias	Auxin-responsive protein IAA27 OS=Arabidopsis thaliana	0.03	Archaeplastida
LOC_Os02g13520.1	No alias	repressor component Aux/IAA of auxin receptor complex	0.04	Archaeplastida
LOC_Os05g44810.2	No alias	repressor component Aux/IAA of auxin receptor complex	0.03	Archaeplastida
LOC_Os06g22870.1	No alias	Auxin-responsive protein IAA21 OS=Oryza sativa subsp....	0.02	Archaeplastida
LOC_Os12g40900.1	No alias	Auxin-responsive protein IAA31 OS=Oryza sativa subsp....	0.03	Archaeplastida
MA_103160g0010	No alias	Auxin-responsive protein IAA13 OS=Arabidopsis thaliana...	0.02	Archaeplastida
MA_10429925g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_10430843g0020	No alias	Auxin-responsive protein IAA14 OS=Arabidopsis thaliana...	0.03	Archaeplastida
MA_18755g0010	No alias	Auxin-responsive protein IAA13 OS=Arabidopsis thaliana...	0.02	Archaeplastida
MA_608803g0010	No alias	Auxin-responsive protein IAA16 OS=Arabidopsis thaliana...	0.03	Archaeplastida
Mp6g05000.1	No alias	Auxin-responsive protein IAA17 OS=Arabidopsis thaliana...	0.02	Archaeplastida
Smo116126	No alias	Auxin-responsive protein IAA31 OS=Oryza sativa subsp. japonica	0.03	Archaeplastida
Solyc06g008580.3.1	No alias	Auxin-induced protein 22D OS=Vigna radiata var. radiata...	0.03	Archaeplastida
Solyc06g053830.3.1	No alias	Auxin-responsive protein IAA16 OS=Arabidopsis thaliana...	0.03	Archaeplastida
Zm00001e025448_P001	No alias	Auxin-responsive protein IAA4 OS=Oryza sativa subsp....	0.03	Archaeplastida
Zm00001e028059_P002	No alias	Auxin-responsive protein IAA5 OS=Oryza sativa subsp....	0.03	Archaeplastida
Zm00001e034792_P001	No alias	Auxin-responsive protein IAA26 OS=Oryza sativa subsp....	0.03	Archaeplastida
Zm00001e036400_P002	No alias	Auxin-responsive protein IAA9 OS=Oryza sativa subsp....	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0003002	regionalization	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IDA	Interproscan
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0007389	pattern specification process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009416	response to light stimulus	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009606	tropism	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009629	response to gravity	None	Extended
BP	GO:0009630	gravitropism	IMP	Interproscan
BP	GO:0009642	response to light intensity	None	Extended
BP	GO:0009646	response to absence of light	None	Extended
BP	GO:0009647	skotomorphogenesis	IMP	Interproscan
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009733	response to auxin	IEP	Interproscan
BP	GO:0009733	response to auxin	TAS	Interproscan
BP	GO:0009791	post-embryonic development	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010051	xylem and phloem pattern formation	None	Extended
BP	GO:0010588	cotyledon vascular tissue pattern formation	IMP	Interproscan
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0042221	response to chemical	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0048364	root development	IMP	Interproscan
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0099402	plant organ development	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005496	steroid binding	IEP	Neighborhood
CC	GO:0005654	nucleoplasm	IEP	Neighborhood
BP	GO:0006355	regulation of transcription, DNA-templated	IEP	Neighborhood
BP	GO:0006470	protein dephosphorylation	IEP	Neighborhood
MF	GO:0008142	oxysterol binding	IEP	Neighborhood
MF	GO:0008146	sulfotransferase activity	IEP	Neighborhood
BP	GO:0008356	asymmetric cell division	IEP	Neighborhood
MF	GO:0008476	protein-tyrosine sulfotransferase activity	IEP	Neighborhood
BP	GO:0009828	plant-type cell wall loosening	IEP	Neighborhood
BP	GO:0009831	plant-type cell wall modification involved in multidimensional cell growth	IEP	Neighborhood
BP	GO:0009894	regulation of catabolic process	IEP	Neighborhood
BP	GO:0009937	regulation of gibberellic acid mediated signaling pathway	IEP	Neighborhood
BP	GO:0009956	radial pattern formation	IEP	Neighborhood
BP	GO:0010082	regulation of root meristem growth	IEP	Neighborhood
BP	GO:0010468	regulation of gene expression	IEP	Neighborhood
MF	GO:0016628	oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	IEP	Neighborhood
MF	GO:0016630	protochlorophyllide reductase activity	IEP	Neighborhood
MF	GO:0016782	transferase activity, transferring sulfur-containing groups	IEP	Neighborhood
CC	GO:0019005	SCF ubiquitin ligase complex	IEP	Neighborhood
BP	GO:0019222	regulation of metabolic process	IEP	Neighborhood
BP	GO:0019827	stem cell population maintenance	IEP	Neighborhood
BP	GO:0031537	regulation of anthocyanin metabolic process	IEP	Neighborhood
BP	GO:0032507	maintenance of protein location in cell	IEP	Neighborhood
MF	GO:0032934	sterol binding	IEP	Neighborhood
BP	GO:0042547	cell wall modification involved in multidimensional cell growth	IEP	Neighborhood
BP	GO:0045185	maintenance of protein location	IEP	Neighborhood
BP	GO:0046685	response to arsenic-containing substance	IEP	Neighborhood
MF	GO:0047807	cytokinin 7-beta-glucosyltransferase activity	IEP	Neighborhood
BP	GO:0050789	regulation of biological process	IEP	Neighborhood
BP	GO:0051252	regulation of RNA metabolic process	IEP	Neighborhood
BP	GO:0051457	maintenance of protein location in nucleus	IEP	Neighborhood
BP	GO:0051651	maintenance of location in cell	IEP	Neighborhood
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	Neighborhood
BP	GO:0065007	biological regulation	IEP	Neighborhood
BP	GO:0072595	maintenance of protein localization in organelle	IEP	Neighborhood
MF	GO:0080062	cytokinin 9-beta-glucosyltransferase activity	IEP	Neighborhood
BP	GO:0080090	regulation of primary metabolic process	IEP	Neighborhood
BP	GO:0098727	maintenance of cell number	IEP	Neighborhood
BP	GO:1900000	regulation of anthocyanin catabolic process	IEP	Neighborhood
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	Neighborhood
BP	GO:2000280	regulation of root development	IEP	Neighborhood
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR033389	AUX/IAA_dom	73	170

External Links

No external refs found!

AT2G46990 (IAA20)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation