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  5. Gb_34523

Gb_34523


Description : Ribulose bisphosphate carboxylase large chain (Fragment) OS=Dendrophthora clavata (sp|p48699|rbl_dencl : 170.0)


Gene families : OG0001030 (Archaeplastida) Phylogenetic Tree(s): OG0001030_tree ,
OG_05_0000707 (LandPlants) Phylogenetic Tree(s): OG_05_0000707_tree ,
OG_06_0000483 (SeedPlants) Phylogenetic Tree(s): OG_06_0000483_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_34523
Cluster HCCA: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00272640 evm_27.TU.AmTr_v1... Ribulose bisphosphate carboxylase large chain OS=Nymphaea alba 0.05 Archaeplastida
AMTR_s00012p00184400 evm_27.TU.AmTr_v1... Ribulose bisphosphate carboxylase large chain... 0.05 Archaeplastida
AMTR_s00606p00006850 evm_27.TU.AmTr_v1... Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.05 Archaeplastida
AT2G07732 No alias Ribulose bisphosphate carboxylase large chain, catalytic domain 0.05 Archaeplastida
ATCG00490 RBCL ribulose-bisphosphate carboxylases 0.09 Archaeplastida
ATMG00280 ORF110A Ribulose bisphosphate carboxylase large chain, catalytic domain 0.03 Archaeplastida
GSVIVT01013856001 No alias Ribulose bisphosphate carboxylase large chain (Fragment)... 0.05 Archaeplastida
GSVIVT01022403001 No alias Ribulose bisphosphate carboxylase large chain OS=Sesbania sesban 0.05 Archaeplastida
Gb_18620 No alias Ribulose bisphosphate carboxylase large chain... 0.06 Archaeplastida
LOC_Os01g58020.1 No alias Ribulose bisphosphate carboxylase large chain OS=Oryza... 0.17 Archaeplastida
LOC_Os05g35330.1 No alias Ribulose bisphosphate carboxylase large chain OS=Oryza... 0.04 Archaeplastida
LOC_Os10g21268.1 No alias large subunit of ribulose-1,5-bisphosphat... 0.14 Archaeplastida
LOC_Os11g32770.1 No alias Ribulose bisphosphate carboxylase large chain OS=Oryza... 0.06 Archaeplastida
LOC_Os12g10580.1 No alias component psRPS15 of small ribosomal subunit proteome 0.16 Archaeplastida
MA_103636g0010 No alias Ribulose bisphosphate carboxylase large chain... 0.02 Archaeplastida
Mp3g01300.1 No alias no hits & (original description: none) 0.06 Archaeplastida
Smo137874 No alias Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.12 Archaeplastida
Solyc00g500063.1.1 No alias large subunit of ribulose-1,5-bisphosphat... 0.13 Archaeplastida
Solyc04g039840.1.1 No alias Ribulose bisphosphate carboxylase large chain OS=Vigna... 0.03 Archaeplastida
Solyc07g021200.1.1 No alias Ribulose bisphosphate carboxylase large chain (Fragment)... 0.17 Archaeplastida
Solyc12g062540.3.1 No alias Ribulose bisphosphate carboxylase large chain (Fragment)... 0.14 Archaeplastida
Solyc12g062550.1.1 No alias Ribulose bisphosphate carboxylase large chain OS=Solanum... 0.12 Archaeplastida
Zm00001e002755_P001 No alias Ribulose bisphosphate carboxylase large chain OS=Zea... 0.12 Archaeplastida
Zm00001e031080_P001 No alias Ribulose bisphosphate carboxylase large chain OS=Zea... 0.18 Archaeplastida
Zm00001e042029_P001 No alias large subunit of ribulose-1,5-bisphosphat... 0.17 Archaeplastida
Zm00001e042051_P001 No alias large subunit of ribulose-1,5-bisphosphat... 0.16 Archaeplastida
Zm00001e042083_P001 No alias large subunit of ribulose-1,5-bisphosphat... 0.15 Archaeplastida
Zm00001e042095_P001 No alias large subunit of ribulose-1,5-bisphosphat... 0.15 Archaeplastida
Zm00001e042121_P001 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e042403_P001 No alias large subunit of ribulose-1,5-bisphosphat... 0.15 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0006091 generation of precursor metabolites and energy IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009579 thylakoid IEP Neighborhood
BP GO:0009767 photosynthetic electron transport chain IEP Neighborhood
BP GO:0009772 photosynthetic electron transport in photosystem II IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016168 chlorophyll binding IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
BP GO:0019684 photosynthesis, light reaction IEP Neighborhood
BP GO:0022900 electron transport chain IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
MF GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR000685 RuBisCO_lsu_C 1 91
No external refs found!