Coexpression cluster: Cluster_78 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0022900 electron transport chain 11.64% (17/146) 7.23 0.0 0.0
GO:0019684 photosynthesis, light reaction 9.59% (14/146) 7.63 0.0 0.0
GO:0009767 photosynthetic electron transport chain 9.59% (14/146) 7.63 0.0 0.0
GO:0006091 generation of precursor metabolites and energy 13.01% (19/146) 6.03 0.0 0.0
GO:0009055 electron transfer activity 10.27% (15/146) 5.58 0.0 0.0
GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity 5.48% (8/146) 7.68 0.0 0.0
GO:0009772 photosynthetic electron transport in photosystem II 5.48% (8/146) 7.68 0.0 0.0
GO:0016168 chlorophyll binding 5.48% (8/146) 7.68 0.0 0.0
GO:0055114 oxidation-reduction process 20.55% (30/146) 2.61 0.0 0.0
GO:1902600 proton transmembrane transport 6.85% (10/146) 5.68 0.0 0.0
GO:0005575 cellular_component 24.66% (36/146) 2.21 0.0 0.0
GO:0016491 oxidoreductase activity 19.86% (29/146) 2.51 0.0 0.0
GO:0044237 cellular metabolic process 28.08% (41/146) 1.94 0.0 0.0
GO:0044425 membrane part 14.38% (21/146) 3.13 0.0 0.0
GO:0015986 ATP synthesis coupled proton transport 5.48% (8/146) 6.14 0.0 0.0
GO:0015985 energy coupled proton transport, down electrochemical gradient 5.48% (8/146) 6.14 0.0 0.0
GO:0016651 oxidoreductase activity, acting on NAD(P)H 5.48% (8/146) 6.1 0.0 0.0
GO:0015002 heme-copper terminal oxidase activity 4.79% (7/146) 6.63 0.0 0.0
GO:0009521 photosystem 5.48% (8/146) 6.02 0.0 0.0
GO:0009205 purine ribonucleoside triphosphate metabolic process 6.85% (10/146) 4.99 0.0 0.0
GO:0009144 purine nucleoside triphosphate metabolic process 6.85% (10/146) 4.99 0.0 0.0
GO:0009199 ribonucleoside triphosphate metabolic process 6.85% (10/146) 4.99 0.0 0.0
GO:0098796 membrane protein complex 7.53% (11/146) 4.66 0.0 0.0
GO:0015672 monovalent inorganic cation transport 6.85% (10/146) 5.01 0.0 0.0
GO:0046034 ATP metabolic process 6.85% (10/146) 5.01 0.0 0.0
GO:0044436 thylakoid part 5.48% (8/146) 5.93 0.0 0.0
GO:0008152 metabolic process 34.93% (51/146) 1.52 0.0 0.0
GO:0098655 cation transmembrane transport 6.85% (10/146) 4.93 0.0 0.0
GO:0009141 nucleoside triphosphate metabolic process 6.85% (10/146) 4.93 0.0 0.0
GO:0098660 inorganic ion transmembrane transport 6.85% (10/146) 4.93 0.0 0.0
GO:0098662 inorganic cation transmembrane transport 6.85% (10/146) 4.93 0.0 0.0
GO:0009123 nucleoside monophosphate metabolic process 6.85% (10/146) 4.94 0.0 0.0
GO:0009167 purine ribonucleoside monophosphate metabolic process 6.85% (10/146) 4.94 0.0 0.0
GO:0009161 ribonucleoside monophosphate metabolic process 6.85% (10/146) 4.94 0.0 0.0
GO:0009126 purine nucleoside monophosphate metabolic process 6.85% (10/146) 4.94 0.0 0.0
GO:0034220 ion transmembrane transport 6.85% (10/146) 4.84 0.0 0.0
GO:0009987 cellular process 28.77% (42/146) 1.7 0.0 0.0
GO:0044424 intracellular part 14.38% (21/146) 2.74 0.0 0.0
GO:0016020 membrane 13.01% (19/146) 2.91 0.0 0.0
GO:0009150 purine ribonucleotide metabolic process 6.85% (10/146) 4.5 0.0 0.0
GO:0009259 ribonucleotide metabolic process 6.85% (10/146) 4.5 0.0 0.0
GO:0003954 NADH dehydrogenase activity 4.11% (6/146) 6.56 0.0 0.0
GO:0008137 NADH dehydrogenase (ubiquinone) activity 4.11% (6/146) 6.56 0.0 0.0
GO:0050136 NADH dehydrogenase (quinone) activity 4.11% (6/146) 6.56 0.0 0.0
GO:0044464 cell part 14.38% (21/146) 2.63 0.0 0.0
GO:0006163 purine nucleotide metabolic process 6.85% (10/146) 4.49 0.0 0.0
GO:0072521 purine-containing compound metabolic process 6.85% (10/146) 4.47 0.0 0.0
GO:0019693 ribose phosphate metabolic process 6.85% (10/146) 4.44 0.0 0.0
GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor 4.11% (6/146) 6.41 0.0 0.0
GO:0009117 nucleotide metabolic process 6.85% (10/146) 4.28 0.0 0.0
GO:0006753 nucleoside phosphate metabolic process 6.85% (10/146) 4.24 0.0 0.0
GO:0006754 ATP biosynthetic process 5.48% (8/146) 4.86 0.0 0.0
GO:0009142 nucleoside triphosphate biosynthetic process 5.48% (8/146) 4.86 0.0 0.0
GO:0009145 purine nucleoside triphosphate biosynthetic process 5.48% (8/146) 4.86 0.0 0.0
GO:0009206 purine ribonucleoside triphosphate biosynthetic process 5.48% (8/146) 4.86 0.0 0.0
GO:0009201 ribonucleoside triphosphate biosynthetic process 5.48% (8/146) 4.86 0.0 0.0
GO:0009168 purine ribonucleoside monophosphate biosynthetic process 5.48% (8/146) 4.79 0.0 0.0
GO:0009124 nucleoside monophosphate biosynthetic process 5.48% (8/146) 4.79 0.0 0.0
GO:0009127 purine nucleoside monophosphate biosynthetic process 5.48% (8/146) 4.79 0.0 0.0
GO:0009156 ribonucleoside monophosphate biosynthetic process 5.48% (8/146) 4.79 0.0 0.0
GO:0055086 nucleobase-containing small molecule metabolic process 6.85% (10/146) 4.07 0.0 0.0
GO:0017144 drug metabolic process 6.85% (10/146) 4.02 0.0 0.0
GO:0046390 ribose phosphate biosynthetic process 5.48% (8/146) 4.73 0.0 0.0
GO:0009260 ribonucleotide biosynthetic process 5.48% (8/146) 4.73 0.0 0.0
GO:0009152 purine ribonucleotide biosynthetic process 5.48% (8/146) 4.73 0.0 0.0
GO:0006164 purine nucleotide biosynthetic process 5.48% (8/146) 4.72 0.0 0.0
GO:0072522 purine-containing compound biosynthetic process 5.48% (8/146) 4.68 0.0 0.0
GO:0009579 thylakoid 3.42% (5/146) 6.56 0.0 0.0
GO:0019637 organophosphate metabolic process 6.85% (10/146) 3.82 0.0 0.0
GO:0009165 nucleotide biosynthetic process 5.48% (8/146) 4.49 0.0 0.0
GO:1901293 nucleoside phosphate biosynthetic process 5.48% (8/146) 4.49 0.0 0.0
GO:1901135 carbohydrate derivative metabolic process 6.85% (10/146) 3.78 0.0 0.0
GO:1901566 organonitrogen compound biosynthetic process 8.9% (13/146) 3.13 0.0 0.0
GO:0015979 photosynthesis 4.11% (6/146) 5.48 0.0 0.0
GO:1901137 carbohydrate derivative biosynthetic process 5.48% (8/146) 4.39 0.0 0.0
GO:0032991 protein-containing complex 10.27% (15/146) 2.78 0.0 0.0
GO:0006812 cation transport 6.85% (10/146) 3.7 0.0 0.0
GO:0044271 cellular nitrogen compound biosynthetic process 8.9% (13/146) 2.96 0.0 0.0
GO:0090407 organophosphate biosynthetic process 5.48% (8/146) 4.08 0.0 0.0
GO:0015078 proton transmembrane transporter activity 4.11% (6/146) 4.92 0.0 0.0
GO:0008150 biological_process 35.62% (52/146) 1.04 0.0 0.0
GO:0048037 cofactor binding 10.96% (16/146) 2.37 0.0 0.0
GO:0006811 ion transport 6.85% (10/146) 3.25 0.0 0.0
GO:0015077 monovalent inorganic cation transmembrane transporter activity 4.11% (6/146) 4.3 1e-06 2e-06
GO:0018130 heterocycle biosynthetic process 6.16% (9/146) 3.2 1e-06 2e-06
GO:0044249 cellular biosynthetic process 9.59% (14/146) 2.34 1e-06 2e-06
GO:0019438 aromatic compound biosynthetic process 6.16% (9/146) 3.15 1e-06 2e-06
GO:1901576 organic substance biosynthetic process 9.59% (14/146) 2.27 1e-06 4e-06
GO:0034641 cellular nitrogen compound metabolic process 10.96% (16/146) 2.07 1e-06 4e-06
GO:0034654 nucleobase-containing compound biosynthetic process 5.48% (8/146) 3.32 2e-06 4e-06
GO:1901362 organic cyclic compound biosynthetic process 6.16% (9/146) 3.0 2e-06 5e-06
GO:0016676 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor 2.05% (3/146) 6.73 2e-06 6e-06
GO:0004129 cytochrome-c oxidase activity 2.05% (3/146) 6.73 2e-06 6e-06
GO:0016675 oxidoreductase activity, acting on a heme group of donors 2.05% (3/146) 6.73 2e-06 6e-06
GO:0009058 biosynthetic process 9.59% (14/146) 2.13 4e-06 1e-05
GO:0046906 tetrapyrrole binding 7.53% (11/146) 2.5 5e-06 1.1e-05
GO:0022890 inorganic cation transmembrane transporter activity 4.11% (6/146) 3.78 6e-06 1.3e-05
GO:0044281 small molecule metabolic process 6.85% (10/146) 2.55 1e-05 2.2e-05
GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) 2.05% (3/146) 6.03 1.2e-05 2.7e-05
GO:0008324 cation transmembrane transporter activity 4.11% (6/146) 3.56 1.3e-05 2.9e-05
GO:0016021 integral component of membrane 6.85% (10/146) 2.37 2.7e-05 6e-05
GO:0031224 intrinsic component of membrane 6.85% (10/146) 2.34 3.3e-05 7.1e-05
GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain 2.05% (3/146) 5.34 5.5e-05 0.000118
GO:0046483 heterocycle metabolic process 8.22% (12/146) 1.96 6.8e-05 0.000144
GO:0015318 inorganic molecular entity transmembrane transporter activity 4.11% (6/146) 3.13 7e-05 0.000148
GO:0009060 aerobic respiration 1.37% (2/146) 7.14 7.4e-05 0.000152
GO:0045333 cellular respiration 1.37% (2/146) 7.14 7.4e-05 0.000152
GO:0015980 energy derivation by oxidation of organic compounds 1.37% (2/146) 7.14 7.4e-05 0.000152
GO:0006725 cellular aromatic compound metabolic process 8.22% (12/146) 1.93 8.1e-05 0.000165
GO:1901360 organic cyclic compound metabolic process 8.22% (12/146) 1.9 0.000102 0.000206
GO:0055085 transmembrane transport 6.85% (10/146) 2.13 0.000106 0.000213
GO:0015075 ion transmembrane transporter activity 4.11% (6/146) 3.0 0.000114 0.000225
GO:0042773 ATP synthesis coupled electron transport 1.37% (2/146) 6.82 0.000123 0.000242
GO:0006139 nucleobase-containing compound metabolic process 7.53% (11/146) 1.95 0.00015 0.000293
GO:0022904 respiratory electron transport chain 1.37% (2/146) 6.34 0.000258 0.000497
GO:0000287 magnesium ion binding 2.74% (4/146) 3.49 0.000469 0.000897
GO:0051540 metal cluster binding 2.05% (3/146) 4.14 0.000666 0.001252
GO:0051536 iron-sulfur cluster binding 2.05% (3/146) 4.14 0.000666 0.001252
GO:0003674 molecular_function 39.73% (58/146) 0.53 0.000991 0.001849
GO:0048038 quinone binding 1.37% (2/146) 5.06 0.001629 0.003015
GO:0044444 cytoplasmic part 4.11% (6/146) 2.21 0.001992 0.003654
GO:0051234 establishment of localization 6.85% (10/146) 1.56 0.002307 0.004164
GO:0006810 transport 6.85% (10/146) 1.56 0.00229 0.004167
GO:0051179 localization 6.85% (10/146) 1.54 0.002449 0.004384
GO:0005840 ribosome 2.74% (4/146) 2.62 0.004234 0.007519
GO:0006412 translation 2.74% (4/146) 2.57 0.00483 0.008509
GO:0003735 structural constituent of ribosome 2.74% (4/146) 2.54 0.005101 0.008848
GO:0043043 peptide biosynthetic process 2.74% (4/146) 2.54 0.005101 0.008848
GO:0006518 peptide metabolic process 2.74% (4/146) 2.5 0.005675 0.009766
GO:0043604 amide biosynthetic process 2.74% (4/146) 2.46 0.006185 0.010562
GO:0043228 non-membrane-bounded organelle 2.74% (4/146) 2.44 0.006614 0.011123
GO:0043232 intracellular non-membrane-bounded organelle 2.74% (4/146) 2.44 0.006614 0.011123
GO:0051287 NAD binding 1.37% (2/146) 4.02 0.006838 0.011329
GO:0005198 structural molecule activity 2.74% (4/146) 2.42 0.006836 0.01141
GO:0043603 cellular amide metabolic process 2.74% (4/146) 2.41 0.007062 0.011528
GO:0016984 ribulose-bisphosphate carboxylase activity 0.68% (1/146) 7.14 0.007056 0.011604
GO:1990904 ribonucleoprotein complex 2.74% (4/146) 2.4 0.007294 0.011819
GO:1901564 organonitrogen compound metabolic process 10.27% (15/146) 0.98 0.009201 0.014801
GO:0015995 chlorophyll biosynthetic process 0.68% (1/146) 6.56 0.010566 0.016875
GO:0043229 intracellular organelle 3.42% (5/146) 1.79 0.015397 0.024415
GO:0043226 organelle 3.42% (5/146) 1.79 0.015544 0.024474
GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) 0.68% (1/146) 5.82 0.017548 0.027434
GO:0006796 phosphate-containing compound metabolic process 6.85% (10/146) 1.1 0.019001 0.029292
GO:0006793 phosphorus metabolic process 6.85% (10/146) 1.1 0.019001 0.029292
GO:0043168 anion binding 9.59% (14/146) 0.88 0.020149 0.030849
GO:0003824 catalytic activity 21.23% (31/146) 0.53 0.020779 0.031595
GO:0046148 pigment biosynthetic process 0.68% (1/146) 5.56 0.021021 0.031746
GO:0022857 transmembrane transporter activity 4.11% (6/146) 1.46 0.023116 0.034674
GO:0015994 chlorophyll metabolic process 0.68% (1/146) 5.34 0.024481 0.035756
GO:0005739 mitochondrion 0.68% (1/146) 5.34 0.024481 0.035756
GO:0006779 porphyrin-containing compound biosynthetic process 0.68% (1/146) 5.34 0.024481 0.035756
GO:0005215 transporter activity 4.11% (6/146) 1.44 0.024089 0.035891
GO:0015977 carbon fixation 0.68% (1/146) 5.14 0.02793 0.040525
GO:1901363 heterocyclic compound binding 14.38% (21/146) 0.61 0.034215 0.049005
GO:0097159 organic cyclic compound binding 14.38% (21/146) 0.61 0.034215 0.049005
GO:0019843 rRNA binding 0.68% (1/146) 4.82 0.03479 0.049509
GO:0006807 nitrogen compound metabolic process 10.96% (16/146) 0.71 0.035275 0.049879
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_2 0.036 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_61 0.105 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_107 0.158 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_92 0.105 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_93 0.038 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_151 0.042 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_199 0.032 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_221 0.022 Archaeplastida Compare
Gingko biloba HCCA Cluster_18 0.02 Archaeplastida Compare
Gingko biloba HCCA Cluster_30 0.061 Archaeplastida Compare
Gingko biloba HCCA Cluster_44 0.025 Archaeplastida Compare
Gingko biloba HCCA Cluster_51 0.022 Archaeplastida Compare
Gingko biloba HCCA Cluster_89 0.143 Archaeplastida Compare
Gingko biloba HCCA Cluster_101 0.023 Archaeplastida Compare
Gingko biloba HCCA Cluster_156 0.024 Archaeplastida Compare
Gingko biloba HCCA Cluster_207 0.019 Archaeplastida Compare
Gingko biloba HCCA Cluster_297 0.045 Archaeplastida Compare
Zea mays HCCA Cluster_44 0.051 Archaeplastida Compare
Zea mays HCCA Cluster_83 0.024 Archaeplastida Compare
Zea mays HCCA Cluster_109 0.048 Archaeplastida Compare
Zea mays HCCA Cluster_160 0.107 Archaeplastida Compare
Zea mays HCCA Cluster_246 0.029 Archaeplastida Compare
Zea mays HCCA Cluster_255 0.053 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_8 0.114 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_9 0.04 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_82 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_54 0.061 Archaeplastida Compare
Oryza sativa HCCA Cluster_4 0.032 Archaeplastida Compare
Oryza sativa HCCA Cluster_125 0.198 Archaeplastida Compare
Oryza sativa HCCA Cluster_144 0.021 Archaeplastida Compare
Oryza sativa HCCA Cluster_233 0.035 Archaeplastida Compare
Oryza sativa HCCA Cluster_238 0.071 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_27 0.146 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_1 0.094 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_2 0.03 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_3 0.058 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_4 0.033 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_5 0.08 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_16 0.038 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_18 0.031 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_24 0.03 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_34 0.024 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_76 0.036 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_83 0.147 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_93 0.032 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_102 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_113 0.046 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_149 0.035 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_199 0.026 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_312 0.021 Archaeplastida Compare
Vitis vinifera HCCA Cluster_20 0.03 Archaeplastida Compare
Vitis vinifera HCCA Cluster_25 0.104 Archaeplastida Compare
Vitis vinifera HCCA Cluster_99 0.028 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_37 0.062 Archaeplastida Compare
Sequences (146) (download table)

InterPro Domains

GO Terms

Family Terms