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  5. Gb_34646

Gb_34646


Description : cuticular lipid exporter (PEC1). subfamily ABCG transporter


Gene families : OG0000050 (Archaeplastida) Phylogenetic Tree(s): OG0000050_tree ,
OG_05_0000049 (LandPlants) Phylogenetic Tree(s): OG_05_0000049_tree ,
OG_06_0000052 (SeedPlants) Phylogenetic Tree(s): OG_06_0000052_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_34646
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
AT3G53480 PIS1, ABCG37,... pleiotropic drug resistance 9 0.03 Archaeplastida
Cre17.g728400 No alias Pleiotropic drug resistance protein 3 OS=Nicotiana tabacum 0.02 Archaeplastida
GSVIVT01017185001 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida
GSVIVT01017187001 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida
Gb_15493 No alias subfamily ABCG transporter 0.04 Archaeplastida
LOC_Os01g42350.1 No alias subfamily ABCG transporter 0.03 Archaeplastida
LOC_Os02g11760.1 No alias subfamily ABCG transporter 0.04 Archaeplastida
LOC_Os02g32690.1 No alias subfamily ABCG transporter 0.07 Archaeplastida
LOC_Os08g29570.1 No alias subfamily ABCG transporter 0.02 Archaeplastida
MA_10429038g0010 No alias subfamily ABCG transporter 0.02 Archaeplastida
Pp3c18_21520V3.1 No alias ABC-2 and Plant PDR ABC-type transporter family protein 0.02 Archaeplastida
Pp3c19_18700V3.1 No alias pleiotropic drug resistance 7 0.02 Archaeplastida
Pp3c5_23360V3.1 No alias pleiotropic drug resistance 7 0.03 Archaeplastida
Pp3c5_3240V3.1 No alias ABC-2 and Plant PDR ABC-type transporter family protein 0.04 Archaeplastida
Smo424639 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
Smo441717 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida
Smo96758 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida
Solyc05g018510.3.1 No alias cuticular lipid exporter (PEC1). subfamily ABCG transporter 0.05 Archaeplastida
Solyc12g019640.2.1 No alias subfamily ABCG transporter 0.03 Archaeplastida
Solyc12g098210.3.1 No alias subfamily ABCG transporter 0.02 Archaeplastida
Zm00001e016714_P002 No alias cuticular lipid exporter (PEC1). subfamily ABCG transporter 0.03 Archaeplastida
Zm00001e019932_P002 No alias subfamily ABCG transporter 0.02 Archaeplastida
Zm00001e027849_P001 No alias subfamily ABCG transporter 0.02 Archaeplastida
Zm00001e033689_P001 No alias subfamily ABCG transporter 0.03 Archaeplastida
Zm00001e033690_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e039353_P001 No alias subfamily ABCG transporter 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016887 ATPase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
BP GO:0008037 cell recognition IEP Neighborhood
MF GO:0015002 heme-copper terminal oxidase activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
BP GO:0048544 recognition of pollen IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
InterPro domains Description Start Stop
IPR013581 PDR_assoc 722 784
IPR013525 ABC_2_trans 505 717
IPR013525 ABC_2_trans 1152 1365
IPR003439 ABC_transporter-like 165 351
IPR003439 ABC_transporter-like 854 1006
IPR029481 ABC_trans_N 84 143
No external refs found!