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  5. Gb_34848

Gb_34848


Description : transcription factor (ERF)


Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0000066 (SeedPlants) Phylogenetic Tree(s): OG_06_0000066_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_34848
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00135920 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AMTR_s00009p00143340 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AMTR_s00010p00099690 evm_27.TU.AmTr_v1... Ethylene-responsive transcription factor ERF110... 0.03 Archaeplastida
AMTR_s00040p00195730 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AMTR_s00069p00141520 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AMTR_s00150p00091360 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
AT1G22810 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT4G17490 ERF-6-6, ERF6, ATERF6 ethylene responsive element binding factor 6 0.04 Archaeplastida
AT4G17500 ERF-1, ATERF-1 ethylene responsive element binding factor 1 0.03 Archaeplastida
AT5G61600 ERF104 ethylene response factor 104 0.04 Archaeplastida
GSVIVT01013905001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
GSVIVT01013913001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.06 Archaeplastida
GSVIVT01013916001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.06 Archaeplastida
GSVIVT01013918001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.05 Archaeplastida
GSVIVT01021098001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01031388001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01031747001 No alias Alpha-amylase type B isozyme OS=Hordeum vulgare 0.04 Archaeplastida
Gb_01212 No alias transcription factor (DREB) 0.04 Archaeplastida
Gb_01213 No alias transcription factor (DREB) 0.04 Archaeplastida
Gb_11856 No alias Ethylene-responsive transcription factor RAP2-3... 0.06 Archaeplastida
Gb_12965 No alias Ethylene-responsive transcription factor ABR1... 0.04 Archaeplastida
Gb_32806 No alias transcription factor (DREB) 0.05 Archaeplastida
LOC_Os04g48350.1 No alias Dehydration-responsive element-binding protein 1E... 0.06 Archaeplastida
LOC_Os04g55520.1 No alias transcription factor (DREB) 0.03 Archaeplastida
LOC_Os09g28440.1 No alias transcription factor (ERF) 0.03 Archaeplastida
LOC_Os12g39330.1 No alias transcription factor (ERF). transcription factor (ERN1) 0.05 Archaeplastida
MA_103035g0010 No alias transcription factor (ERF) 0.05 Archaeplastida
MA_184464g0010 No alias transcription factor (ERF) 0.03 Archaeplastida
MA_19420g0010 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_426919g0030 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_88g0020 No alias transcription factor (DREB) 0.07 Archaeplastida
MA_914123g0010 No alias transcription factor (DREB) 0.04 Archaeplastida
MA_9304g0020 No alias transcription factor (ERF) 0.03 Archaeplastida
Mp6g08690.1 No alias transcription factor (DREB) 0.03 Archaeplastida
Pp3c10_20000V3.1 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
Pp3c11_10660V3.1 No alias Integrase-type DNA-binding superfamily protein 0.04 Archaeplastida
Pp3c1_5010V3.1 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
Pp3c27_1350V3.1 No alias ERF domain protein 12 0.03 Archaeplastida
Pp3c2_36690V3.1 No alias Integrase-type DNA-binding superfamily protein 0.04 Archaeplastida
Pp3c3_6830V3.1 No alias Integrase-type DNA-binding superfamily protein 0.04 Archaeplastida
Pp3c4_23930V3.1 No alias ethylene responsive element binding factor 1 0.02 Archaeplastida
Pp3c6_19350V3.1 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
Pp3c6_20480V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Solyc01g090560.4.1 No alias transcription factor (DREB) 0.06 Archaeplastida
Solyc03g026280.3.1 No alias transcription factor (DREB). transcription factor (CBF/DREB1) 0.04 Archaeplastida
Solyc03g093540.1.1 No alias transcription factor (ERF) 0.05 Archaeplastida
Solyc03g093550.1.1 No alias transcription factor (ERF) 0.04 Archaeplastida
Solyc03g124110.2.1 No alias transcription factor (DREB). transcription factor (CBF/DREB1) 0.04 Archaeplastida
Solyc05g051180.3.1 No alias transcription factor (ERF) 0.05 Archaeplastida
Solyc06g082590.1.1 No alias transcription factor (ERF) 0.04 Archaeplastida
Solyc07g064890.1.1 No alias transcription factor (ERF) 0.04 Archaeplastida
Solyc10g006130.1.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc10g076380.2.1 No alias transcription factor (DREB) 0.07 Archaeplastida
Solyc11g012980.1.1 No alias Ethylene-responsive transcription factor ERF012... 0.03 Archaeplastida
Solyc12g056590.2.1 No alias transcription factor (ERF) 0.06 Archaeplastida
Zm00001e003707_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e003800_P001 No alias transcription factor (ERF) 0.02 Archaeplastida
Zm00001e006982_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e007205_P001 No alias Dehydration-responsive element-binding protein 1E... 0.02 Archaeplastida
Zm00001e009947_P001 No alias transcription factor (ERF) 0.02 Archaeplastida
Zm00001e014413_P001 No alias transcription factor (DREB) 0.04 Archaeplastida
Zm00001e015429_P001 No alias transcription factor (DREB) 0.02 Archaeplastida
Zm00001e015430_P001 No alias Dehydration-responsive element-binding protein 1G... 0.02 Archaeplastida
Zm00001e019567_P001 No alias transcription factor (ERF) 0.04 Archaeplastida
Zm00001e021579_P001 No alias Pathogenesis-related genes transcriptional activator... 0.03 Archaeplastida
Zm00001e027351_P001 No alias transcription factor (ERF) 0.02 Archaeplastida
Zm00001e032033_P001 No alias transcription factor (ERF) 0.02 Archaeplastida
Zm00001e032483_P001 No alias transcription factor (DREB) 0.03 Archaeplastida
Zm00001e034242_P001 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e037869_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e040033_P001 No alias No annotation 0.02 Archaeplastida
Zm00001e041532_P001 No alias transcription factor (DREB) 0.03 Archaeplastida
Zm00001e041620_P002 No alias transcription factor (ERF) 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 162 212
No external refs found!