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  5. Gb_35180

Gb_35180


Description : Probable calcium-binding protein CML25 OS=Arabidopsis thaliana (sp|q9fyk2|cml25_arath : 136.0)


Gene families : OG0000031 (Archaeplastida) Phylogenetic Tree(s): OG0000031_tree ,
OG_05_0000085 (LandPlants) Phylogenetic Tree(s): OG_05_0000085_tree ,
OG_06_0000352 (SeedPlants) Phylogenetic Tree(s): OG_06_0000352_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_35180
Cluster HCCA: Cluster_218

Target Alias Description ECC score Gene Family Method Actions
AT2G41410 No alias Calcium-binding EF-hand family protein 0.05 Archaeplastida
AT4G12860 UNE14 EF hand calcium-binding protein family 0.03 Archaeplastida
Cpa|evm.model.tig00000692.65 No alias Calmodulin-2 OS=Oryza sativa subsp. japonica 0.01 Archaeplastida
GSVIVT01004914001 No alias Probable calcium-binding protein CML13 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_28443 No alias Calmodulin-like protein 2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Gb_30178 No alias Calmodulin-like protein 6 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os01g72080.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os03g59770.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os06g07560.1 No alias Probable calcium-binding protein CML30 OS=Oryza sativa... 0.07 Archaeplastida
LOC_Os09g24580.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os11g04560.1 No alias Probable calcium-binding protein CML36 OS=Arabidopsis... 0.02 Archaeplastida
MA_103558g0010 No alias Calcium-binding protein CML42 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_224196g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_269415g0010 No alias Calmodulin-like protein 5 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_472945g0010 No alias Calmodulin-like protein 5 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Mp6g10070.1 No alias Calmodulin-like protein 5 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Mp6g18000.1 No alias Calmodulin-like protein 3 OS=Arabidopsis thaliana... 0.01 Archaeplastida
Pp3c13_2400V3.1 No alias EF hand calcium-binding protein family 0.01 Archaeplastida
Pp3c17_17270V3.1 No alias centrin2 0.02 Archaeplastida
Pp3c25_10220V3.1 No alias EF hand calcium-binding protein family 0.01 Archaeplastida
Pp3c5_10920V3.1 No alias EF hand calcium-binding protein family 0.01 Archaeplastida
Pp3c6_1770V3.1 No alias EF hand calcium-binding protein family 0.02 Archaeplastida
Pp3c9_25180V3.1 No alias EF hand calcium-binding protein family 0.01 Archaeplastida
Solyc03g118810.1.1 No alias Calcium-binding allergen Ole e 8 OS=Olea europaea... 0.03 Archaeplastida
Solyc04g018110.1.1 No alias Probable calcium-binding protein CML35 OS=Arabidopsis... 0.05 Archaeplastida
Solyc06g083000.1.1 No alias Calmodulin-like protein 7 OS=Arabidopsis thaliana... 0.07 Archaeplastida
Solyc10g074740.2.1 No alias Calcium-binding protein CAST OS=Solanum tuberosum... 0.02 Archaeplastida
Zm00001e021836_P002 No alias Probable calcium-binding protein CML7 OS=Oryza sativa... 0.04 Archaeplastida
Zm00001e029211_P001 No alias Probable calcium-binding protein CML7 OS=Oryza sativa... 0.03 Archaeplastida
Zm00001e038252_P001 No alias Probable calcium-binding protein CML27 OS=Oryza sativa... 0.02 Archaeplastida
Zm00001e039793_P001 No alias Probable calcium-binding protein CML28 OS=Oryza sativa... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Neighborhood
BP GO:0000097 sulfur amino acid biosynthetic process IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
BP GO:0006534 cysteine metabolic process IEP Neighborhood
BP GO:0006535 cysteine biosynthetic process from serine IEP Neighborhood
BP GO:0006563 L-serine metabolic process IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
MF GO:0008374 O-acyltransferase activity IEP Neighborhood
BP GO:0008652 cellular amino acid biosynthetic process IEP Neighborhood
MF GO:0009001 serine O-acetyltransferase activity IEP Neighborhood
BP GO:0009069 serine family amino acid metabolic process IEP Neighborhood
BP GO:0009070 serine family amino acid biosynthetic process IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
BP GO:0016053 organic acid biosynthetic process IEP Neighborhood
MF GO:0016407 acetyltransferase activity IEP Neighborhood
MF GO:0016412 serine O-acyltransferase activity IEP Neighborhood
MF GO:0016413 O-acetyltransferase activity IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
BP GO:0019344 cysteine biosynthetic process IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
BP GO:0044272 sulfur compound biosynthetic process IEP Neighborhood
BP GO:0044283 small molecule biosynthetic process IEP Neighborhood
BP GO:0046394 carboxylic acid biosynthetic process IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:1901605 alpha-amino acid metabolic process IEP Neighborhood
BP GO:1901607 alpha-amino acid biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 186 249
IPR002048 EF_hand_dom 113 172
No external refs found!