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  5. Gb_35557

Gb_35557


Description : RING-H2-class E3 ligase


Gene families : OG0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0003924 (LandPlants) Phylogenetic Tree(s): OG_05_0003924_tree ,
OG_06_0005596 (SeedPlants) Phylogenetic Tree(s): OG_06_0005596_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_35557
Cluster HCCA: Cluster_322

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00229930 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AMTR_s00129p00065710 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
AT2G01150 RHA2B RING-H2 finger protein 2B 0.05 Archaeplastida
Cpa|evm.model.tig00020629.137 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
Gb_28980 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os01g11520.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os02g50930.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os05g45060.1 No alias RING-H2 finger protein ATL68 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os07g42610.1 No alias E3 ubiquitin-protein ligase EL5 OS=Oryza sativa subsp.... 0.08 Archaeplastida
LOC_Os08g37760.1 No alias RING-H2-class E3 ligase 0.06 Archaeplastida
MA_105610g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_85088g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Mp2g11860.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Pp3c21_17280V3.1 No alias RING/U-box superfamily protein 0.04 Archaeplastida
Solyc01g105620.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc04g074790.3.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e019438_P001 No alias RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Zm00001e023832_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e030136_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e038107_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Neighborhood
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 86 129
No external refs found!