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  5. Gb_35868

Gb_35868


Description : component SKI3 of SUPERKILLER (SKI) regulation complex


Gene families : OG0004584 (Archaeplastida) Phylogenetic Tree(s): OG0004584_tree ,
OG_05_0004528 (LandPlants) Phylogenetic Tree(s): OG_05_0004528_tree ,
OG_06_0008196 (SeedPlants) Phylogenetic Tree(s): OG_06_0008196_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_35868
Cluster HCCA: Cluster_193

Target Alias Description ECC score Gene Family Method Actions
AT1G76630 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Archaeplastida
Cre12.g493550 No alias No description available 0.02 Archaeplastida
GSVIVT01013460001 No alias RNA processing.RNA decay.exosome complex.associated... 0.03 Archaeplastida
MA_8519142g0010 No alias Tetratricopeptide repeat protein SKI3 OS=Arabidopsis... 0.02 Archaeplastida
Pp3c9_11110V3.1 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000726 non-recombinational repair IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003678 DNA helicase activity IEP Neighborhood
MF GO:0003774 motor activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005875 microtubule associated complex IEP Neighborhood
BP GO:0006302 double-strand break repair IEP Neighborhood
BP GO:0006303 double-strand break repair via nonhomologous end joining IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
CC GO:0016459 myosin complex IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
CC GO:0030286 dynein complex IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
MF GO:0044877 protein-containing complex binding IEP Neighborhood
MF GO:0061630 ubiquitin protein ligase activity IEP Neighborhood
MF GO:0061659 ubiquitin-like protein ligase activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!