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  5. Gb_36164

Gb_36164


Description : component RPL22 of LSU proteome component


Gene families : OG0002238 (Archaeplastida) Phylogenetic Tree(s): OG0002238_tree ,
OG_05_0002172 (LandPlants) Phylogenetic Tree(s): OG_05_0002172_tree ,
OG_06_0002838 (SeedPlants) Phylogenetic Tree(s): OG_06_0002838_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_36164
Cluster HCCA: Cluster_129

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00069p00189250 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.1 Archaeplastida
AT3G05560 No alias Ribosomal L22e protein family 0.21 Archaeplastida
AT5G27770 No alias Ribosomal L22e protein family 0.17 Archaeplastida
Cpa|evm.model.tig00001206.7 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.16 Archaeplastida
Cre07.g357850 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.26 Archaeplastida
GSVIVT01028021001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.09 Archaeplastida
GSVIVT01031130001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.19 Archaeplastida
GSVIVT01031158001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.18 Archaeplastida
GSVIVT01035141001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.19 Archaeplastida
LOC_Os03g22340.1 No alias component RPL22 of LSU proteome component 0.21 Archaeplastida
LOC_Os07g47710.1 No alias component RPL22 of LSU proteome component 0.18 Archaeplastida
MA_130453g0010 No alias component RPL22 of LSU proteome component 0.12 Archaeplastida
Mp4g02920.1 No alias component RPL22 of LSU proteome component 0.21 Archaeplastida
Pp3c11_630V3.1 No alias Ribosomal L22e protein family 0.21 Archaeplastida
Pp3c11_680V3.1 No alias Ribosomal L22e protein family 0.07 Archaeplastida
Pp3c1_120V3.1 No alias Ribosomal L22e protein family 0.19 Archaeplastida
Pp3c2_28500V3.1 No alias Ribosomal L22e protein family 0.28 Archaeplastida
Pp3c2_28510V3.1 No alias Ribosomal L22e protein family 0.28 Archaeplastida
Pp3c6_5370V3.1 No alias Ribosomal L22e protein family 0.06 Archaeplastida
Pp3c7_27030V3.1 No alias Ribosomal L22e protein family 0.16 Archaeplastida
Smo270704 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.1 Archaeplastida
Solyc01g099830.3.1 No alias component RPL22 of LSU proteome component 0.24 Archaeplastida
Solyc09g075150.3.1 No alias component RPL22 of LSU proteome component 0.13 Archaeplastida
Solyc09g075155.1.1 No alias component RPL22 of LSU proteome component 0.16 Archaeplastida
Zm00001e010958_P001 No alias component RPL22 of LSU proteome component 0.09 Archaeplastida
Zm00001e035835_P001 No alias component RPL22 of LSU proteome component 0.2 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005741 mitochondrial outer membrane IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
CC GO:0015934 large ribosomal subunit IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
CC GO:0031090 organelle membrane IEP Neighborhood
CC GO:0031966 mitochondrial membrane IEP Neighborhood
CC GO:0031968 organelle outer membrane IEP Neighborhood
BP GO:0034728 nucleosome organization IEP Neighborhood
CC GO:0044391 ribosomal subunit IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood
CC GO:0098588 bounding membrane of organelle IEP Neighborhood
CC GO:0098805 whole membrane IEP Neighborhood
InterPro domains Description Start Stop
IPR002671 Ribosomal_L22e 20 129
No external refs found!