- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : AP-1 complex subunit sigma-2 OS=Arabidopsis thaliana (sp|o23685|ap1s2_arath : 166.0)
Gene families : OG0000560 (Archaeplastida) Phylogenetic Tree(s): OG0000560_tree ,
OG_05_0058666 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0051749 (SeedPlants) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Gb_36359 | |
| Cluster | HCCA: Cluster_203 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT3G50860 | No alias | Clathrin adaptor complex small chain family protein | 0.03 | Archaeplastida | |
| Cpa|evm.model.tig00020780.8 | No alias | AP-2 complex subunit sigma OS=Arabidopsis thaliana | 0.03 | Archaeplastida | |
| Cre07.g324600 | No alias | Vesicle trafficking.clathrin coated vesicle (CCV)... | 0.03 | Archaeplastida | |
| GSVIVT01013725001 | No alias | Vesicle trafficking.clathrin coated vesicle (CCV)... | 0.03 | Archaeplastida | |
| LOC_Os03g12710.1 | No alias | small subunit sigma of AP-3 Golgi to vacuole cargo... | 0.03 | Archaeplastida | |
| LOC_Os12g10560.1 | No alias | small subunit sigma of AP-2 cargo adaptor complex | 0.02 | Archaeplastida | |
| Mp1g27490.1 | No alias | small subunit sigma of AP-1 trans-Golgi network cargo... | 0.02 | Archaeplastida | |
| Pp3c9_6760V3.1 | No alias | SNARE-like superfamily protein | 0.03 | Archaeplastida | |
| Solyc02g085240.4.1 | No alias | small subunit sigma of AP-3 Golgi to vacuole cargo... | 0.02 | Archaeplastida | |
| Zm00001e022339_P001 | No alias | small subunit sigma of AP-4 vacuole cargo adaptor complex | 0.02 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003743 | translation initiation factor activity | IEP | Neighborhood |
| MF | GO:0003779 | actin binding | IEP | Neighborhood |
| MF | GO:0005506 | iron ion binding | IEP | Neighborhood |
| CC | GO:0005852 | eukaryotic translation initiation factor 3 complex | IEP | Neighborhood |
| BP | GO:0006629 | lipid metabolic process | IEP | Neighborhood |
| BP | GO:0006869 | lipid transport | IEP | Neighborhood |
| BP | GO:0008610 | lipid biosynthetic process | IEP | Neighborhood |
| BP | GO:0015850 | organic hydroxy compound transport | IEP | Neighborhood |
| BP | GO:0015918 | sterol transport | IEP | Neighborhood |
| MF | GO:0016872 | intramolecular lyase activity | IEP | Neighborhood |
| BP | GO:0032365 | intracellular lipid transport | IEP | Neighborhood |
| BP | GO:0032366 | intracellular sterol transport | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR022775 | AP_mu_sigma_su | 13 | 98 |
| No external refs found! |