Gb_36497

Description : subfamily ABCB transporter

Gene families : OG0000057 (Archaeplastida) Phylogenetic Tree(s): OG0000057_tree ,
OG_05_0000720 (LandPlants) Phylogenetic Tree(s): OG_05_0000720_tree ,
OG_06_0000544 (SeedPlants) Phylogenetic Tree(s): OG_06_0000544_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_36497
Cluster	HCCA: Cluster_139

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00007p00263610	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
AMTR_s00010p00254310	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.04	Archaeplastida
AMTR_s00045p00108620	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
AMTR_s00045p00109940	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.04	Archaeplastida
AMTR_s00076p00195870	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
AMTR_s00145p00075460	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
AT1G28010	ABCB14, ATABCB14, PGP14	P-glycoprotein 14	0.02	Archaeplastida
AT3G28345	No alias	ABC transporter family protein	0.03	Archaeplastida
AT3G28415	No alias	ABC transporter family protein	0.03	Archaeplastida
AT3G55320	PGP20	P-glycoprotein 20	0.01	Archaeplastida
AT3G62150	PGP21	P-glycoprotein 21	0.05	Archaeplastida
AT4G01820	PGP3, MDR3	P-glycoprotein 3	0.04	Archaeplastida
AT4G01830	PGP5	P-glycoprotein 5	0.05	Archaeplastida
AT4G25960	PGP2	P-glycoprotein 2	0.05	Archaeplastida
AT5G46540	PGP7	P-glycoprotein 7	0.02	Archaeplastida
GSVIVT01013125001	No alias	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
GSVIVT01017696001	No alias	Solute transport.primary active transport.ABC...	0.06	Archaeplastida
GSVIVT01021366001	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
GSVIVT01028256001	No alias	Solute transport.primary active transport.ABC...	0.04	Archaeplastida
Gb_06993	No alias	serine carboxypeptidase. subfamily ABCB transporter	0.04	Archaeplastida
Gb_07563	No alias	subfamily ABCB transporter	0.06	Archaeplastida
Gb_08706	No alias	subfamily ABCB transporter	0.02	Archaeplastida
Gb_10215	No alias	subfamily ABCB transporter	0.04	Archaeplastida
Gb_32125	No alias	subfamily ABCB transporter	0.06	Archaeplastida
Gb_33057	No alias	subfamily ABCB transporter	0.07	Archaeplastida
Gb_33058	No alias	subfamily ABCB transporter	0.08	Archaeplastida
LOC_Os01g18670.1	No alias	subfamily ABCB transporter	0.03	Archaeplastida
LOC_Os01g34970.1	No alias	subfamily ABCB transporter	0.02	Archaeplastida
LOC_Os01g35030.1	No alias	subfamily ABCB transporter	0.02	Archaeplastida
LOC_Os01g50080.1	No alias	subfamily ABCB transporter	0.02	Archaeplastida
LOC_Os01g50160.1	No alias	subfamily ABCB transporter	0.03	Archaeplastida
LOC_Os02g09720.1	No alias	subfamily ABCB transporter	0.04	Archaeplastida
LOC_Os02g46680.1	No alias	subfamily ABCB transporter	0.04	Archaeplastida
LOC_Os04g38570.1	No alias	auxin efflux transporter (ABCB19)	0.02	Archaeplastida
LOC_Os08g05710.1	No alias	subfamily ABCB transporter	0.02	Archaeplastida
MA_10432922g0010	No alias	subfamily ABCB transporter	0.05	Archaeplastida
MA_111099g0010	No alias	subfamily ABCB transporter	0.03	Archaeplastida
MA_560534g0010	No alias	No annotation	0.02	Archaeplastida
MA_6870g0010	No alias	subfamily ABCB transporter	0.03	Archaeplastida
MA_79399g0010	No alias	Putative multidrug resistance protein OS=Oryza sativa...	0.06	Archaeplastida
MA_83806g0010	No alias	subfamily ABCB transporter	0.02	Archaeplastida
Mp2g11920.1	No alias	subfamily ABCB transporter	0.06	Archaeplastida
Mp3g11830.1	No alias	auxin efflux transporter (ABCB19). subfamily ABCB transporter	0.02	Archaeplastida
Mp7g04390.1	No alias	subfamily ABCB transporter	0.04	Archaeplastida
Pp3c17_16450V3.1	No alias	ATP binding cassette subfamily B19	0.04	Archaeplastida
Pp3c1_34680V3.1	No alias	P-glycoprotein 10	0.02	Archaeplastida
Smo230688	No alias	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
Smo408755	No alias	Solute transport.primary active transport.ABC...	0.05	Archaeplastida
Smo410515	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
Smo419451	No alias	Solute transport.primary active transport.ABC...	0.01	Archaeplastida
Smo74892	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
Smo99885	No alias	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
Solyc03g005860.4.1	No alias	subfamily ABCB transporter	0.03	Archaeplastida
Solyc03g093650.3.1	No alias	subfamily ABCB transporter	0.04	Archaeplastida
Solyc03g122070.3.1	No alias	subfamily ABCB transporter	0.01	Archaeplastida
Solyc06g009280.1.1	No alias	subfamily ABCB transporter	0.03	Archaeplastida
Solyc07g064120.2.1	No alias	subfamily ABCB transporter	0.01	Archaeplastida
Solyc09g008240.3.1	No alias	subfamily ABCB transporter	0.03	Archaeplastida
Solyc11g067300.2.1	No alias	subfamily ABCB transporter	0.03	Archaeplastida
Solyc11g067310.3.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
Solyc12g098840.3.1	No alias	subfamily ABCB transporter	0.04	Archaeplastida
Zm00001e003866_P001	No alias	subfamily ABCB transporter	0.03	Archaeplastida
Zm00001e019933_P001	No alias	subfamily ABCB transporter	0.03	Archaeplastida
Zm00001e020770_P002	No alias	subfamily ABCB transporter	0.02	Archaeplastida
Zm00001e025438_P001	No alias	subfamily ABCB transporter	0.04	Archaeplastida
Zm00001e028117_P001	No alias	subfamily ABCB transporter	0.03	Archaeplastida
Zm00001e041087_P002	No alias	subfamily ABCB transporter	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
MF	GO:0015405	P-P-bond-hydrolysis-driven transmembrane transporter activity	None	Extended
CC	GO:0016021	integral component of membrane	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATPase activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042623	ATPase activity, coupled	None	Extended
MF	GO:0042626	ATPase activity, coupled to transmembrane movement of substances	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043492	ATPase activity, coupled to movement of substances	None	Extended
CC	GO:0044425	membrane part	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Neighborhood
MF	GO:0003854	3-beta-hydroxy-delta5-steroid dehydrogenase activity	IEP	Neighborhood
MF	GO:0003968	RNA-directed 5'-3' RNA polymerase activity	IEP	Neighborhood
MF	GO:0004601	peroxidase activity	IEP	Neighborhood
MF	GO:0004672	protein kinase activity	IEP	Neighborhood
MF	GO:0005515	protein binding	IEP	Neighborhood
BP	GO:0006464	cellular protein modification process	IEP	Neighborhood
BP	GO:0006468	protein phosphorylation	IEP	Neighborhood
BP	GO:0006694	steroid biosynthetic process	IEP	Neighborhood
BP	GO:0006793	phosphorus metabolic process	IEP	Neighborhood
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	Neighborhood
BP	GO:0006807	nitrogen compound metabolic process	IEP	Neighborhood
BP	GO:0006979	response to oxidative stress	IEP	Neighborhood
BP	GO:0007165	signal transduction	IEP	Neighborhood
BP	GO:0008037	cell recognition	IEP	Neighborhood
BP	GO:0008152	metabolic process	IEP	Neighborhood
BP	GO:0008202	steroid metabolic process	IEP	Neighborhood
MF	GO:0008236	serine-type peptidase activity	IEP	Neighborhood
BP	GO:0009690	cytokinin metabolic process	IEP	Neighborhood
BP	GO:0009987	cellular process	IEP	Neighborhood
BP	GO:0010817	regulation of hormone levels	IEP	Neighborhood
CC	GO:0016020	membrane	IEP	Neighborhood
MF	GO:0016209	antioxidant activity	IEP	Neighborhood
MF	GO:0016229	steroid dehydrogenase activity	IEP	Neighborhood
MF	GO:0016301	kinase activity	IEP	Neighborhood
BP	GO:0016310	phosphorylation	IEP	Neighborhood
MF	GO:0016645	oxidoreductase activity, acting on the CH-NH group of donors	IEP	Neighborhood
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	Neighborhood
MF	GO:0016740	transferase activity	IEP	Neighborhood
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Neighborhood
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Neighborhood
MF	GO:0016779	nucleotidyltransferase activity	IEP	Neighborhood
MF	GO:0017171	serine hydrolase activity	IEP	Neighborhood
MF	GO:0019139	cytokinin dehydrogenase activity	IEP	Neighborhood
BP	GO:0019538	protein metabolic process	IEP	Neighborhood
MF	GO:0020037	heme binding	IEP	Neighborhood
BP	GO:0022414	reproductive process	IEP	Neighborhood
MF	GO:0033764	steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	Neighborhood
MF	GO:0034062	5'-3' RNA polymerase activity	IEP	Neighborhood
BP	GO:0034754	cellular hormone metabolic process	IEP	Neighborhood
BP	GO:0036211	protein modification process	IEP	Neighborhood
BP	GO:0042445	hormone metabolic process	IEP	Neighborhood
BP	GO:0043170	macromolecule metabolic process	IEP	Neighborhood
BP	GO:0043412	macromolecule modification	IEP	Neighborhood
MF	GO:0043531	ADP binding	IEP	Neighborhood
BP	GO:0044237	cellular metabolic process	IEP	Neighborhood
BP	GO:0044238	primary metabolic process	IEP	Neighborhood
BP	GO:0044260	cellular macromolecule metabolic process	IEP	Neighborhood
BP	GO:0044267	cellular protein metabolic process	IEP	Neighborhood
MF	GO:0046906	tetrapyrrole binding	IEP	Neighborhood
MF	GO:0048037	cofactor binding	IEP	Neighborhood
BP	GO:0048544	recognition of pollen	IEP	Neighborhood
BP	GO:0050789	regulation of biological process	IEP	Neighborhood
BP	GO:0050794	regulation of cellular process	IEP	Neighborhood
BP	GO:0055114	oxidation-reduction process	IEP	Neighborhood
BP	GO:0065007	biological regulation	IEP	Neighborhood
BP	GO:0071704	organic substance metabolic process	IEP	Neighborhood
MF	GO:0097747	RNA polymerase activity	IEP	Neighborhood
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Neighborhood
MF	GO:0140110	transcription regulator activity	IEP	Neighborhood
BP	GO:1901564	organonitrogen compound metabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like	217	364
IPR011527	ABC1_TM_dom	581	722
IPR011527	ABC1_TM_dom	2	143
IPR003439	ABC_transporter-like	780	945

External Links

No external refs found!

Gb_36497

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation