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  5. Gb_36720

Gb_36720


Description : COB cellulose microfibrils and hemicellulose interaction protein


Gene families : OG0000661 (Archaeplastida) Phylogenetic Tree(s): OG0000661_tree ,
OG_05_0000695 (LandPlants) Phylogenetic Tree(s): OG_05_0000695_tree ,
OG_06_0000657 (SeedPlants) Phylogenetic Tree(s): OG_06_0000657_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_36720
Cluster HCCA: Cluster_214

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00083860 evm_27.TU.AmTr_v1... Cell wall.cellulose.synthesis.cellulose microfibrils and... 0.04 Archaeplastida
AMTR_s00047p00216570 evm_27.TU.AmTr_v1... Cell wall.cellulose.synthesis.cellulose microfibrils and... 0.02 Archaeplastida
AT1G09790 COBL6 COBRA-like protein 6 precursor 0.02 Archaeplastida
AT5G15630 IRX6, COBL4 COBRA-like extracellular glycosyl-phosphatidyl... 0.05 Archaeplastida
AT5G60920 COB COBRA-like extracellular glycosyl-phosphatidyl... 0.1 Archaeplastida
GSVIVT01008128001 No alias Cell wall.cellulose.synthesis.cellulose microfibrils and... 0.06 Archaeplastida
GSVIVT01008129001 No alias Cell wall.cellulose.synthesis.cellulose microfibrils and... 0.04 Archaeplastida
GSVIVT01023291001 No alias Cell wall.cellulose.synthesis.cellulose microfibrils and... 0.02 Archaeplastida
GSVIVT01036565001 No alias Cell wall.cellulose.synthesis.cellulose microfibrils and... 0.04 Archaeplastida
GSVIVT01036566001 No alias Cell wall.cellulose.synthesis.cellulose microfibrils and... 0.03 Archaeplastida
Gb_36719 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.03 Archaeplastida
LOC_Os03g30260.1 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.03 Archaeplastida
LOC_Os03g54750.1 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.07 Archaeplastida
LOC_Os05g32110.1 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.07 Archaeplastida
MA_106654g0010 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.08 Archaeplastida
MA_637485g0010 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.05 Archaeplastida
Mp7g06600.1 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.07 Archaeplastida
Pp3c12_4550V3.1 No alias COBRA-like protein 1 precursor 0.04 Archaeplastida
Pp3c20_16270V3.1 No alias COBRA-like extracellular glycosyl-phosphatidyl... 0.08 Archaeplastida
Pp3c2_9820V3.1 No alias COBRA-like protein 1 precursor 0.02 Archaeplastida
Smo271954 No alias Cell wall.cellulose.synthesis.cellulose microfibrils and... 0.06 Archaeplastida
Solyc02g065765.1.1 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.07 Archaeplastida
Solyc03g070440.4.1 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.05 Archaeplastida
Solyc03g114900.3.1 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.04 Archaeplastida
Zm00001e005710_P002 No alias No annotation 0.08 Archaeplastida
Zm00001e012022_P001 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.07 Archaeplastida
Zm00001e035505_P001 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.02 Archaeplastida
Zm00001e038043_P001 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.02 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0010215 cellulose microfibril organization IEA Interproscan
CC GO:0031225 anchored component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004568 chitinase activity IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
MF GO:0004857 enzyme inhibitor activity IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006022 aminoglycan metabolic process IEP Neighborhood
BP GO:0006026 aminoglycan catabolic process IEP Neighborhood
BP GO:0006030 chitin metabolic process IEP Neighborhood
BP GO:0006032 chitin catabolic process IEP Neighborhood
BP GO:0006040 amino sugar metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0009250 glucan biosynthetic process IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016051 carbohydrate biosynthetic process IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016759 cellulose synthase activity IEP Neighborhood
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Neighborhood
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Neighborhood
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
MF GO:0035251 UDP-glucosyltransferase activity IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
BP GO:0042737 drug catabolic process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
BP GO:0046348 amino sugar catabolic process IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
BP GO:0051273 beta-glucan metabolic process IEP Neighborhood
BP GO:0051274 beta-glucan biosynthetic process IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Neighborhood
BP GO:1901071 glucosamine-containing compound metabolic process IEP Neighborhood
BP GO:1901072 glucosamine-containing compound catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR006918 COBRA_pln 73 236
No external refs found!