Description : Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum (sp|p10978|polx_tobac : 129.0)
Gene families : OG0005782 (Archaeplastida) Phylogenetic Tree(s): OG0005782_tree ,
OG_05_0004779 (LandPlants) Phylogenetic Tree(s): OG_05_0004779_tree ,
OG_06_0003962 (SeedPlants) Phylogenetic Tree(s): OG_06_0003962_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Gb_36863 | |
Cluster | HCCA: Cluster_253 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Gb_03541 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.25 | Archaeplastida | |
Gb_12821 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.03 | Archaeplastida | |
Gb_13448 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.08 | Archaeplastida | |
Gb_22556 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.05 | Archaeplastida | |
Gb_32539 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.03 | Archaeplastida | |
Pp3c2_8510V3.1 | No alias | No annotation | 0.01 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0015074 | DNA integration | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001584 | Integrase_cat-core | 7 | 102 |
No external refs found! |