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  5. Gb_36974

Gb_36974


Description : DIS3-like exonuclease 2 OS=Arabidopsis thaliana (sp|p0dm58|di3l2_arath : 612.0)


Gene families : OG0001141 (Archaeplastida) Phylogenetic Tree(s): OG0001141_tree ,
OG_05_0007837 (LandPlants) Phylogenetic Tree(s): OG_05_0007837_tree ,
OG_06_0008891 (SeedPlants) Phylogenetic Tree(s): OG_06_0008891_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_36974
Cluster HCCA: Cluster_324

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01008904001 No alias DIS3-like exonuclease 2 OS=Arabidopsis thaliana 0.04 Archaeplastida
LOC_Os03g03710.1 No alias exoribonuclease (Dis3/RRP44) 0.03 Archaeplastida
MA_207701g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_40294g0010 No alias DIS3-like exonuclease 2 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Mp3g18110.1 No alias Exosome complex exonuclease RRP44 homolog A... 0.02 Archaeplastida
Mp5g20950.1 No alias DIS3-like exonuclease 2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Mp8g05460.1 No alias exoribonuclease (Dis3/RRP44) 0.02 Archaeplastida
Pp3c16_17530V3.1 No alias ribonuclease II family protein 0.03 Archaeplastida
Pp3c2_21290V3.1 No alias Ribonuclease II/R family protein 0.06 Archaeplastida
Smo156135 No alias RNA processing.RNA decay.exosome complex.associated... 0.02 Archaeplastida
Smo445658 No alias Exosome complex exonuclease RRP44 homolog A... 0.02 Archaeplastida
Solyc02g082460.3.1 No alias exoribonuclease (Dis3/RRP44) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0004540 ribonuclease activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
MF GO:0017069 snRNA binding IEP Neighborhood
MF GO:0017070 U6 snRNA binding IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0030623 U5 snRNA binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!