Gb_37071

Description : cytidine deaminase

Gene families : OG0003511 (Archaeplastida) Phylogenetic Tree(s): OG0003511_tree ,
OG_05_0003294 (LandPlants) Phylogenetic Tree(s): OG_05_0003294_tree ,
OG_06_0003056 (SeedPlants) Phylogenetic Tree(s): OG_06_0003056_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_37071
Cluster	HCCA: Cluster_71

Target	Alias	Description	ECC score	Gene Family Method	Actions
Pp3c7_23670V3.1	No alias	cytidine deaminase 1	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004126	cytidine deaminase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006213	pyrimidine nucleoside metabolic process	None	Extended
BP	GO:0006216	cytidine catabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009116	nucleoside metabolic process	None	Extended
BP	GO:0009119	ribonucleoside metabolic process	None	Extended
BP	GO:0009164	nucleoside catabolic process	None	Extended
BP	GO:0009972	cytidine deamination	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	None	Extended
MF	GO:0016814	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines	None	Extended
MF	GO:0019239	deaminase activity	None	Extended
BP	GO:0019439	aromatic compound catabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034655	nucleobase-containing compound catabolic process	None	Extended
BP	GO:0034656	nucleobase-containing small molecule catabolic process	None	Extended
BP	GO:0042454	ribonucleoside catabolic process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044270	cellular nitrogen compound catabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044282	small molecule catabolic process	None	Extended
BP	GO:0046087	cytidine metabolic process	None	Extended
BP	GO:0046131	pyrimidine ribonucleoside metabolic process	None	Extended
BP	GO:0046133	pyrimidine ribonucleoside catabolic process	None	Extended
BP	GO:0046135	pyrimidine nucleoside catabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0046700	heterocycle catabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0055086	nucleobase-containing small molecule metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072527	pyrimidine-containing compound metabolic process	None	Extended
BP	GO:0072529	pyrimidine-containing compound catabolic process	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901136	carbohydrate derivative catabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901361	organic cyclic compound catabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901565	organonitrogen compound catabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended
BP	GO:1901657	glycosyl compound metabolic process	None	Extended
BP	GO:1901658	glycosyl compound catabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0001882	nucleoside binding	IEP	Neighborhood
MF	GO:0001883	purine nucleoside binding	IEP	Neighborhood
MF	GO:0003924	GTPase activity	IEP	Neighborhood
MF	GO:0005525	GTP binding	IEP	Neighborhood
BP	GO:0006810	transport	IEP	Neighborhood
BP	GO:0006811	ion transport	IEP	Neighborhood
BP	GO:0006835	dicarboxylic acid transport	IEP	Neighborhood
BP	GO:0015711	organic anion transport	IEP	Neighborhood
BP	GO:0015740	C4-dicarboxylate transport	IEP	Neighborhood
BP	GO:0015743	malate transport	IEP	Neighborhood
BP	GO:0015849	organic acid transport	IEP	Neighborhood
CC	GO:0016020	membrane	IEP	Neighborhood
MF	GO:0016462	pyrophosphatase activity	IEP	Neighborhood
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	Neighborhood
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	Neighborhood
MF	GO:0016872	intramolecular lyase activity	IEP	Neighborhood
MF	GO:0017111	nucleoside-triphosphatase activity	IEP	Neighborhood
MF	GO:0019001	guanyl nucleotide binding	IEP	Neighborhood
MF	GO:0019829	cation-transporting ATPase activity	IEP	Neighborhood
MF	GO:0022853	active ion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0032549	ribonucleoside binding	IEP	Neighborhood
MF	GO:0032550	purine ribonucleoside binding	IEP	Neighborhood
MF	GO:0032561	guanyl ribonucleotide binding	IEP	Neighborhood
CC	GO:0033178	proton-transporting two-sector ATPase complex, catalytic domain	IEP	Neighborhood
MF	GO:0036442	proton-exporting ATPase activity	IEP	Neighborhood
MF	GO:0042625	ATPase coupled ion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0044769	ATPase activity, coupled to transmembrane movement of ions, rotational mechanism	IEP	Neighborhood
BP	GO:0046942	carboxylic acid transport	IEP	Neighborhood
MF	GO:0046961	proton-transporting ATPase activity, rotational mechanism	IEP	Neighborhood
BP	GO:0048193	Golgi vesicle transport	IEP	Neighborhood
BP	GO:0051179	localization	IEP	Neighborhood
BP	GO:0051234	establishment of localization	IEP	Neighborhood
BP	GO:0071702	organic substance transport	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR013171	Cyd/dCyd_deaminase_Zn-bd	135	289
IPR002125	CMP_dCMP_dom	28	115

External Links

No external refs found!

Gb_37071

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation