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  5. Gb_37369

Gb_37369


Description : Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum (sp|p10978|polx_tobac : 389.0)


Gene families : OG0001067 (Archaeplastida) Phylogenetic Tree(s): OG0001067_tree ,
OG_05_0000560 (LandPlants) Phylogenetic Tree(s): OG_05_0000560_tree ,
OG_06_0001243 (SeedPlants) Phylogenetic Tree(s): OG_06_0001243_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_37369
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
Gb_02022 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.03 Archaeplastida
Gb_02590 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.08 Archaeplastida
Gb_13769 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.03 Archaeplastida
Gb_21061 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.05 Archaeplastida
Gb_22123 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 Archaeplastida
Gb_27700 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.02 Archaeplastida
Gb_40037 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 Archaeplastida
Gb_41805 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 Archaeplastida
Pp3c13_21660V3.1 No alias cysteine-rich RLK (RECEPTOR-like protein kinase) 8 0.02 Archaeplastida
Solyc10g049415.1.1 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004177 aminopeptidase activity IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0009119 ribonucleoside metabolic process IEP Neighborhood
BP GO:0015074 DNA integration IEP Neighborhood
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Neighborhood
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0042278 purine nucleoside metabolic process IEP Neighborhood
BP GO:0046128 purine ribonucleoside metabolic process IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:1901068 guanosine-containing compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR013103 RVT_2 5 98
No external refs found!