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  5. Gb_37944

Gb_37944


Description : ubiquitin ligase component Doa10 of ER-associated protein degradation (ERAD) machinery


Gene families : OG0004449 (Archaeplastida) Phylogenetic Tree(s): OG0004449_tree ,
OG_05_0004635 (LandPlants) Phylogenetic Tree(s): OG_05_0004635_tree ,
OG_06_0005839 (SeedPlants) Phylogenetic Tree(s): OG_06_0005839_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_37944
Cluster HCCA: Cluster_328

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01022083001 No alias Protein degradation.ER-associated protein degradation... 0.02 Archaeplastida
GSVIVT01031710001 No alias Protein degradation.ER-associated protein degradation... 0.07 Archaeplastida
LOC_Os06g43210.1 No alias ubiquitin ligase component Doa10 of ER-associated... 0.03 Archaeplastida
MA_15237g0010 No alias ubiquitin ligase component Doa10 of ER-associated... 0.04 Archaeplastida
Pp3c9_10370V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Zm00001e030477_P001 No alias ubiquitin ligase component Doa10 of ER-associated... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0004402 histone acetyltransferase activity IEP Neighborhood
MF GO:0005096 GTPase activator activity IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006473 protein acetylation IEP Neighborhood
BP GO:0006475 internal protein amino acid acetylation IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
MF GO:0008047 enzyme activator activity IEP Neighborhood
MF GO:0008080 N-acetyltransferase activity IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
MF GO:0016409 palmitoyltransferase activity IEP Neighborhood
MF GO:0016410 N-acyltransferase activity IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016573 histone acetylation IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
BP GO:0018393 internal peptidyl-lysine acetylation IEP Neighborhood
BP GO:0018394 peptidyl-lysine acetylation IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
MF GO:0030695 GTPase regulator activity IEP Neighborhood
MF GO:0031625 ubiquitin protein ligase binding IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
MF GO:0034212 peptide N-acetyltransferase activity IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
BP GO:0043543 protein acylation IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
MF GO:0044389 ubiquitin-like protein ligase binding IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
InterPro domains Description Start Stop
IPR011016 Znf_RING-CH 46 92
No external refs found!