Gb_38059


Description : histone (H2A)


Gene families : OG0001575 (Archaeplastida) Phylogenetic Tree(s): OG0001575_tree ,
OG_05_0064865 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0058451 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_38059
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00145770 evm_27.TU.AmTr_v1... Chromatin organisation.histones.H2A-type histone 0.02 Archaeplastida
AT2G38810 HTA8 histone H2A 8 0.04 Archaeplastida
AT3G54560 HTA11 histone H2A 11 0.03 Archaeplastida
Solyc06g084090.4.1 No alias histone (H2A) 0.02 Archaeplastida
Zm00001e005636_P001 No alias histone (H2A) 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0006401 RNA catabolic process IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0019439 aromatic compound catabolic process IEP Neighborhood
CC GO:0032299 ribonuclease H2 complex IEP Neighborhood
BP GO:0034655 nucleobase-containing compound catabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
BP GO:0044270 cellular nitrogen compound catabolic process IEP Neighborhood
BP GO:0046700 heterocycle catabolic process IEP Neighborhood
BP GO:1901361 organic cyclic compound catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 76 146
No external refs found!