Coexpression cluster: Cluster_22 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003677 DNA binding 20.73% (34/164) 3.85 0.0 0.0
GO:0044427 chromosomal part 11.59% (19/164) 5.78 0.0 0.0
GO:0032993 protein-DNA complex 9.76% (16/164) 5.93 0.0 0.0
GO:0000786 nucleosome 9.76% (16/164) 5.95 0.0 0.0
GO:0044815 DNA packaging complex 9.76% (16/164) 5.89 0.0 0.0
GO:0003676 nucleic acid binding 23.17% (38/164) 2.83 0.0 0.0
GO:0006259 DNA metabolic process 13.41% (22/164) 4.13 0.0 0.0
GO:0006260 DNA replication 6.71% (11/164) 6.63 0.0 0.0
GO:0006270 DNA replication initiation 4.88% (8/164) 7.65 0.0 0.0
GO:0044422 organelle part 11.59% (19/164) 3.97 0.0 0.0
GO:0044446 intracellular organelle part 11.59% (19/164) 3.97 0.0 0.0
GO:0044424 intracellular part 17.07% (28/164) 2.98 0.0 0.0
GO:0090304 nucleic acid metabolic process 14.63% (24/164) 3.27 0.0 0.0
GO:0046483 heterocycle metabolic process 16.46% (27/164) 2.96 0.0 0.0
GO:0044464 cell part 17.07% (28/164) 2.88 0.0 0.0
GO:0006725 cellular aromatic compound metabolic process 16.46% (27/164) 2.94 0.0 0.0
GO:0006139 nucleobase-containing compound metabolic process 15.85% (26/164) 3.02 0.0 0.0
GO:1901360 organic cyclic compound metabolic process 16.46% (27/164) 2.9 0.0 0.0
GO:0032991 protein-containing complex 13.41% (22/164) 3.17 0.0 0.0
GO:0034641 cellular nitrogen compound metabolic process 16.46% (27/164) 2.66 0.0 0.0
GO:1901363 heterocyclic compound binding 29.88% (49/164) 1.66 0.0 0.0
GO:0097159 organic cyclic compound binding 29.88% (49/164) 1.66 0.0 0.0
GO:0005575 cellular_component 21.34% (35/164) 2.0 0.0 0.0
GO:0009059 macromolecule biosynthetic process 8.54% (14/164) 3.15 0.0 0.0
GO:0009987 cellular process 24.39% (40/164) 1.46 0.0 0.0
GO:0044260 cellular macromolecule metabolic process 17.68% (29/164) 1.81 0.0 0.0
GO:0006807 nitrogen compound metabolic process 20.12% (33/164) 1.59 0.0 0.0
GO:0005488 binding 35.37% (58/164) 1.06 0.0 0.0
GO:0006269 DNA replication, synthesis of RNA primer 1.83% (3/164) 7.98 0.0 0.0
GO:0043170 macromolecule metabolic process 18.29% (30/164) 1.59 0.0 1e-06
GO:0044237 cellular metabolic process 20.12% (33/164) 1.46 0.0 1e-06
GO:0044249 cellular biosynthetic process 9.76% (16/164) 2.37 0.0 1e-06
GO:1901576 organic substance biosynthetic process 9.76% (16/164) 2.3 0.0 1e-06
GO:0034645 cellular macromolecule biosynthetic process 6.71% (11/164) 2.97 0.0 1e-06
GO:0009058 biosynthetic process 9.76% (16/164) 2.16 1e-06 5e-06
GO:0071704 organic substance metabolic process 20.12% (33/164) 1.21 4e-06 2.9e-05
GO:0044238 primary metabolic process 19.51% (32/164) 1.23 5e-06 3e-05
GO:0005524 ATP binding 11.59% (19/164) 1.72 6e-06 3.6e-05
GO:0008144 drug binding 11.59% (19/164) 1.64 1.2e-05 7.4e-05
GO:0035639 purine ribonucleoside triphosphate binding 11.59% (19/164) 1.55 3e-05 0.000154
GO:0033646 host intracellular part 3.05% (5/164) 3.82 2.9e-05 0.000156
GO:0033647 host intracellular organelle 3.05% (5/164) 3.82 2.9e-05 0.000156
GO:0033648 host intracellular membrane-bounded organelle 3.05% (5/164) 3.82 2.9e-05 0.000156
GO:0042025 host cell nucleus 3.05% (5/164) 3.82 2.9e-05 0.000156
GO:0044217 other organism part 3.05% (5/164) 3.82 2.9e-05 0.000156
GO:0033643 host cell part 3.05% (5/164) 3.82 2.9e-05 0.000156
GO:0031262 Ndc80 complex 1.22% (2/164) 7.39 4.7e-05 0.000238
GO:0032559 adenyl ribonucleotide binding 11.59% (19/164) 1.49 5.2e-05 0.000259
GO:0030554 adenyl nucleotide binding 11.59% (19/164) 1.48 5.3e-05 0.000259
GO:0005694 chromosome 1.22% (2/164) 6.98 9.4e-05 0.000447
GO:0032555 purine ribonucleotide binding 11.59% (19/164) 1.34 0.000196 0.000918
GO:0017076 purine nucleotide binding 11.59% (19/164) 1.34 0.000203 0.000931
GO:0032553 ribonucleotide binding 11.59% (19/164) 1.33 0.000221 0.000995
GO:0000166 nucleotide binding 12.2% (20/164) 1.28 0.000236 0.001027
GO:1901265 nucleoside phosphate binding 12.2% (20/164) 1.28 0.000236 0.001027
GO:0043226 organelle 4.88% (8/164) 2.3 0.00025 0.00103
GO:0043229 intracellular organelle 4.88% (8/164) 2.3 0.000246 0.001031
GO:0097367 carbohydrate derivative binding 11.59% (19/164) 1.31 0.000244 0.001039
GO:0036094 small molecule binding 12.2% (20/164) 1.22 0.000398 0.001611
GO:0006310 DNA recombination 1.22% (2/164) 5.98 0.000432 0.00172
GO:0005634 nucleus 3.05% (5/164) 2.91 0.000563 0.002208
GO:0043168 anion binding 11.59% (19/164) 1.16 0.000922 0.003555
GO:0003674 molecular_function 39.02% (64/164) 0.5 0.000972 0.003689
GO:0043231 intracellular membrane-bounded organelle 3.05% (5/164) 2.65 0.001291 0.004747
GO:0043227 membrane-bounded organelle 3.05% (5/164) 2.65 0.001291 0.004747
GO:0008152 metabolic process 20.12% (33/164) 0.73 0.002351 0.008512
GO:0003682 chromatin binding 1.22% (2/164) 4.58 0.003131 0.011167
GO:0003896 DNA primase activity 0.61% (1/164) 7.98 0.00397 0.013954
GO:0051276 chromosome organization 1.22% (2/164) 4.39 0.004083 0.014141
GO:0008017 microtubule binding 1.83% (3/164) 3.15 0.004782 0.016326
GO:0008150 biological_process 25.61% (42/164) 0.56 0.004947 0.016651
GO:0018130 heterocycle biosynthetic process 3.05% (5/164) 2.18 0.00512 0.016996
GO:0019438 aromatic compound biosynthetic process 3.05% (5/164) 2.13 0.005932 0.019421
GO:0015631 tubulin binding 1.83% (3/164) 3.01 0.006323 0.020422
GO:0046654 tetrahydrofolate biosynthetic process 0.61% (1/164) 6.98 0.007924 0.022282
GO:0000776 kinetochore 0.61% (1/164) 6.98 0.007924 0.022282
GO:0008608 attachment of spindle microtubules to kinetochore 0.61% (1/164) 6.98 0.007924 0.022282
GO:0051315 attachment of mitotic spindle microtubules to kinetochore 0.61% (1/164) 6.98 0.007924 0.022282
GO:0004146 dihydrofolate reductase activity 0.61% (1/164) 6.98 0.007924 0.022282
GO:0006333 chromatin assembly or disassembly 0.61% (1/164) 6.98 0.007924 0.022282
GO:0005664 nuclear origin of replication recognition complex 0.61% (1/164) 6.98 0.007924 0.022282
GO:0006275 regulation of DNA replication 0.61% (1/164) 6.98 0.007924 0.022282
GO:0051301 cell division 0.61% (1/164) 6.98 0.007924 0.022282
GO:0032299 ribonuclease H2 complex 0.61% (1/164) 6.98 0.007924 0.022282
GO:0046653 tetrahydrofolate metabolic process 0.61% (1/164) 6.98 0.007924 0.022282
GO:0016070 RNA metabolic process 3.05% (5/164) 2.0 0.00857 0.023817
GO:1901362 organic cyclic compound biosynthetic process 3.05% (5/164) 1.99 0.00902 0.024779
GO:0051052 regulation of DNA metabolic process 0.61% (1/164) 6.39 0.011863 0.029846
GO:0061731 ribonucleoside-diphosphate reductase activity 0.61% (1/164) 6.39 0.011863 0.029846
GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor 0.61% (1/164) 6.39 0.011863 0.029846
GO:0009396 folic acid-containing compound biosynthetic process 0.61% (1/164) 6.39 0.011863 0.029846
GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor 0.61% (1/164) 6.39 0.011863 0.029846
GO:0009263 deoxyribonucleotide biosynthetic process 0.61% (1/164) 6.39 0.011863 0.029846
GO:0007059 chromosome segregation 0.61% (1/164) 6.39 0.011863 0.029846
GO:0032774 RNA biosynthetic process 1.83% (3/164) 2.67 0.012022 0.029929
GO:0008092 cytoskeletal protein binding 1.83% (3/164) 2.69 0.011486 0.031196
GO:0034654 nucleobase-containing compound biosynthetic process 2.44% (4/164) 2.15 0.013029 0.032104
GO:0000808 origin recognition complex 0.61% (1/164) 5.98 0.015787 0.037356
GO:0009262 deoxyribonucleotide metabolic process 0.61% (1/164) 5.98 0.015787 0.037356
GO:0006760 folic acid-containing compound metabolic process 0.61% (1/164) 5.98 0.015787 0.037356
GO:0030688 preribosome, small subunit precursor 0.61% (1/164) 5.98 0.015787 0.037356
GO:0006996 organelle organization 1.22% (2/164) 3.36 0.016304 0.038204
GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor 0.61% (1/164) 5.65 0.019694 0.045699
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_10 0.021 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_27 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_31 0.021 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_49 0.027 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_58 0.081 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_110 0.174 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_166 0.043 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_172 0.04 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_268 0.025 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_40 0.05 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_44 0.041 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_60 0.149 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_128 0.02 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_143 0.021 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_158 0.05 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_181 0.036 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_24 0.035 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_46 0.108 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_212 0.023 Archaeplastida Compare
Gingko biloba HCCA Cluster_184 0.033 Archaeplastida Compare
Gingko biloba HCCA Cluster_188 0.04 Archaeplastida Compare
Zea mays HCCA Cluster_1 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_15 0.021 Archaeplastida Compare
Zea mays HCCA Cluster_29 0.06 Archaeplastida Compare
Zea mays HCCA Cluster_115 0.125 Archaeplastida Compare
Zea mays HCCA Cluster_175 0.088 Archaeplastida Compare
Zea mays HCCA Cluster_277 0.073 Archaeplastida Compare
Zea mays HCCA Cluster_344 0.08 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_3 0.199 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_69 0.07 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_84 0.047 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_100 0.028 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_117 0.026 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_6 0.079 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_117 0.021 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_121 0.075 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_154 0.021 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_184 0.046 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_235 0.036 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_252 0.028 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_287 0.021 Archaeplastida Compare
Picea abies HCCA Cluster_29 0.024 Archaeplastida Compare
Picea abies HCCA Cluster_76 0.026 Archaeplastida Compare
Picea abies HCCA Cluster_104 0.021 Archaeplastida Compare
Picea abies HCCA Cluster_169 0.118 Archaeplastida Compare
Picea abies HCCA Cluster_192 0.051 Archaeplastida Compare
Picea abies HCCA Cluster_194 0.17 Archaeplastida Compare
Picea abies HCCA Cluster_202 0.06 Archaeplastida Compare
Picea abies HCCA Cluster_262 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_289 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_296 0.034 Archaeplastida Compare
Picea abies HCCA Cluster_329 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_335 0.058 Archaeplastida Compare
Picea abies HCCA Cluster_376 0.036 Archaeplastida Compare
Picea abies HCCA Cluster_379 0.092 Archaeplastida Compare
Picea abies HCCA Cluster_423 0.026 Archaeplastida Compare
Picea abies HCCA Cluster_458 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_496 0.029 Archaeplastida Compare
Oryza sativa HCCA Cluster_42 0.021 Archaeplastida Compare
Oryza sativa HCCA Cluster_74 0.021 Archaeplastida Compare
Oryza sativa HCCA Cluster_87 0.106 Archaeplastida Compare
Oryza sativa HCCA Cluster_173 0.09 Archaeplastida Compare
Oryza sativa HCCA Cluster_191 0.045 Archaeplastida Compare
Oryza sativa HCCA Cluster_257 0.028 Archaeplastida Compare
Oryza sativa HCCA Cluster_310 0.046 Archaeplastida Compare
Oryza sativa HCCA Cluster_319 0.021 Archaeplastida Compare
Oryza sativa HCCA Cluster_340 0.035 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_3 0.027 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_29 0.019 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_88 0.033 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_113 0.028 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_116 0.027 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_137 0.02 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_178 0.022 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_204 0.023 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_22 0.029 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_35 0.064 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_38 0.042 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_77 0.151 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_120 0.048 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_139 0.034 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_281 0.063 Archaeplastida Compare
Vitis vinifera HCCA Cluster_50 0.022 Archaeplastida Compare
Vitis vinifera HCCA Cluster_53 0.251 Archaeplastida Compare
Vitis vinifera HCCA Cluster_60 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_121 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_186 0.051 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_10 0.042 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_40 0.026 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_63 0.067 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_110 0.098 Archaeplastida Compare
Sequences (164) (download table)

InterPro Domains

GO Terms

Family Terms