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  5. AT3G03880

AT3G03880


Description : Protein of unknown function (DUF1639)


Gene families : OG0000485 (Archaeplastida) Phylogenetic Tree(s): OG0000485_tree ,
OG_05_0000557 (LandPlants) Phylogenetic Tree(s): OG_05_0000557_tree ,
OG_06_0000501 (SeedPlants) Phylogenetic Tree(s): OG_06_0000501_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G03880
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
MA_13714g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e025739_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e032376_P001 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005739 mitochondrion ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Neighborhood
BP GO:0000578 embryonic axis specification IEP Neighborhood
BP GO:0000724 double-strand break repair via homologous recombination IEP Neighborhood
BP GO:0000725 recombinational repair IEP Neighborhood
BP GO:0002229 defense response to oomycetes IEP Neighborhood
BP GO:0002239 response to oomycetes IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003684 damaged DNA binding IEP Neighborhood
MF GO:0003691 double-stranded telomeric DNA binding IEP Neighborhood
MF GO:0003964 RNA-directed DNA polymerase activity IEP Neighborhood
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP Neighborhood
MF GO:0004629 phospholipase C activity IEP Neighborhood
MF GO:0004930 G-protein coupled receptor activity IEP Neighborhood
CC GO:0005876 spindle microtubule IEP Neighborhood
CC GO:0005885 Arp2/3 protein complex IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006261 DNA-dependent DNA replication IEP Neighborhood
BP GO:0006278 RNA-dependent DNA biosynthetic process IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006370 7-methylguanosine mRNA capping IEP Neighborhood
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Neighborhood
MF GO:0008020 G-protein coupled photoreceptor activity IEP Neighborhood
BP GO:0009269 response to desiccation IEP Neighborhood
BP GO:0009452 7-methylguanosine RNA capping IEP Neighborhood
BP GO:0009555 pollen development IEP Neighborhood
BP GO:0009560 embryo sac egg cell differentiation IEP Neighborhood
BP GO:0009631 cold acclimation IEP Neighborhood
MF GO:0009881 photoreceptor activity IEP Neighborhood
MF GO:0009883 red or far-red light photoreceptor activity IEP Neighborhood
BP GO:0009895 negative regulation of catabolic process IEP Neighborhood
BP GO:0009908 flower development IEP Neighborhood
BP GO:0009956 radial pattern formation IEP Neighborhood
BP GO:0010074 maintenance of meristem identity IEP Neighborhood
BP GO:0010080 regulation of floral meristem growth IEP Neighborhood
BP GO:0010212 response to ionizing radiation IEP Neighborhood
BP GO:0010492 maintenance of shoot apical meristem identity IEP Neighborhood
BP GO:0010506 regulation of autophagy IEP Neighborhood
BP GO:0010507 negative regulation of autophagy IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
MF GO:0016621 cinnamoyl-CoA reductase activity IEP Neighborhood
CC GO:0019005 SCF ubiquitin ligase complex IEP Neighborhood
BP GO:0019321 pentose metabolic process IEP Neighborhood
BP GO:0019827 stem cell population maintenance IEP Neighborhood
BP GO:0022412 cellular process involved in reproduction in multicellular organism IEP Neighborhood
MF GO:0030371 translation repressor activity IEP Neighborhood
BP GO:0031330 negative regulation of cellular catabolic process IEP Neighborhood
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Neighborhood
MF GO:0032182 ubiquitin-like protein binding IEP Neighborhood
BP GO:0032509 endosome transport via multivesicular body sorting pathway IEP Neighborhood
BP GO:0034635 glutathione transport IEP Neighborhood
BP GO:0035265 organ growth IEP Neighborhood
BP GO:0036260 RNA capping IEP Neighborhood
MF GO:0042162 telomeric DNA binding IEP Neighborhood
BP GO:0042732 D-xylose metabolic process IEP Neighborhood
BP GO:0042939 tripeptide transport IEP Neighborhood
MF GO:0043047 single-stranded telomeric DNA binding IEP Neighborhood
MF GO:0043130 ubiquitin binding IEP Neighborhood
BP GO:0045003 double-strand break repair via synthesis-dependent strand annealing IEP Neighborhood
MF GO:0045182 translation regulator activity IEP Neighborhood
MF GO:0051011 microtubule minus-end binding IEP Neighborhood
BP GO:0051128 regulation of cellular component organization IEP Neighborhood
BP GO:0060771 phyllotactic patterning IEP Neighborhood
BP GO:0060772 leaf phyllotactic patterning IEP Neighborhood
BP GO:0060774 auxin mediated signaling pathway involved in phyllotactic patterning IEP Neighborhood
MF GO:0070628 proteasome binding IEP Neighborhood
BP GO:0071897 DNA biosynthetic process IEP Neighborhood
BP GO:0071985 multivesicular body sorting pathway IEP Neighborhood
BP GO:0072337 modified amino acid transport IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
BP GO:0098727 maintenance of cell number IEP Neighborhood
MF GO:0098847 sequence-specific single stranded DNA binding IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR012438 DUF1639 117 166
No external refs found!